Blautia massiliensis: LK422_11310
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Entry
LK422_11310 CDS
T08787
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bmas
Blautia massiliensis
Brite
KEGG Orthology (KO) [BR:
bmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmas03009
]
LK422_11310 (rlmD)
Enzymes [BR:
bmas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LK422_11310 (rlmD)
Ribosome biogenesis [BR:
bmas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LK422_11310 (rlmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_25
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
N6_N4_Mtase
PCMT
Methyltransf_4
UPF0020
Methyltransf_11
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
UEA27698
LinkDB
All DBs
Position
complement(2352759..2353931)
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AA seq
390 aa
AA seq
DB search
MEQKENVCSVAKKCGGCRYQGVSYQEQLRRKQRITEGLLKKFGKVEPIIGMEDPYYYRNK
VHAAFGRDRKGNVISGIYEEKSHRIVSVDDCMIEDKKSQEIIRTIRGMLKSFKIKTYDED
TGYGLLRHVLVRRGFSTGEIMVVLVTVSPIFPSKNNFVKALRKEHPEITTVVLNVNDRQT
SMVLGDRNIVLYGPGFIKDRLMGLTFRISPSSFYQVNPVQTEVLYGKAMEFAAMTGKERV
IDAYCGTGTIGIIASGNARDVIGVELNRDAIRDARMNARENKIRNVRFVPGDAGWFMEGM
AAEGEKVEVVLMDPPRSGSDRKFLHSLLTLSPEKIVYVSCNPESLARDLACLTKRDYLVK
KMQPVDMFPLTDSVEVVCLLENRRTRPGRA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaagagaatgtctgttcagttgcgaagaaatgcggcggttgccgttatcag
ggtgtatcctaccaggagcagcttcgcaggaaacagagaattacagaaggccttctgaaa
aaattcggaaaagtagagccgatcattggaatggaagatccctattattacagaaacaaa
gttcatgcagcttttggccgtgaccggaagggaaacgtaatttccgggatttatgaggag
aagagtcataggatcgtttccgtagatgactgtatgatcgaagataaaaaaagtcaggaa
atcatccgtaccatacgtggtatgctgaaatcctttaagatcaagacctatgatgaggat
acaggatatggacttctccgccatgtgcttgtgcggagaggcttttccacaggagagatc
atggtggtattagttacggtttctccaatatttccatctaagaataactttgtaaaagct
ctccgtaaagagcatccggagatcactacggtggttctcaatgtcaatgacagacagaca
agcatggtacttggagaccgcaatatcgtactttacggaccgggattcatcaaagatcga
cttatgggactgaccttccgtatttctccatcttctttttatcaggtaaatcctgtgcag
acagaagtactttacggaaaggctatggagtttgcggcaatgacaggaaaagagagggtg
atcgatgcttactgcggcacaggtactatcgggatcatcgcttccgggaatgccagggat
gtcattggtgtagaactgaaccgtgatgctatccgtgatgccagaatgaatgccagggaa
aacaagatccgtaatgttcgttttgttccgggagatgcaggatggtttatggaaggaatg
gcagcagagggagagaaggtggaggttgttctcatggatccgccacgttccggaagtgac
cgtaaattccttcactcccttttgactctttcaccggaaaaaattgtttatgtatcctgc
aacccggaaagcctggcaagagatcttgcctgccttactaagagagattacctggtaaag
aagatgcagccggttgatatgttcccgctcaccgattcagtggaggttgtttgccttctg
gagaatcgtaggaccagaccgggaagagcttag
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