Blautia massiliensis: LK422_11595
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Entry
LK422_11595 CDS
T08787
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bmas
Blautia massiliensis
Brite
KEGG Orthology (KO) [BR:
bmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmas03009
]
LK422_11595 (rlmD)
Enzymes [BR:
bmas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LK422_11595 (rlmD)
Ribosome biogenesis [BR:
bmas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LK422_11595 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
PrmA
Methyltransf_15
Methyltransf_11
PCMT
Ubie_methyltran
Methyltransf_4
UPF0020
TRM
TPMT
Motif
Other DBs
NCBI-ProteinID:
UEA27751
LinkDB
All DBs
Position
complement(2425114..2426481)
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AA seq
455 aa
AA seq
DB search
MEFRKNDILTLDIEDCGVDGEGIGKADGFTVFVKDAVIGDRIKAKIIKAKKNYGYGRLME
VITPSPYRVKPACSIARQCGGCQLQALSYEQQLKFKEKKVRGHLERIGGFQNLDMEPIMG
MEDPYHYRNKAQFPVGKNKDGKIITGFYAGRTHSIIDNRECILGVKQNKEVLDRVIGHME
KYHVQPYDEATGKGLVRHIMIRYGFHTDEMMVCLILNGDKIPAEKALVESLCEIPEMTSI
TINVNKKRNNVILGDQLRLLWGQSYITDSIGDISYQISPLSFFQVNPIQTEKLYGKALEY
AGLTGNETVWDLYCGIGTISLFLAQKAKFVRGVEIVPQAIDNARENAKLNGIENVEFFVG
KAEEVLPREYEKNGVYADVIVVDPPRKGCDEVLLNTILKMKPERVVYVSCDSATLARDLK
VLCAEDYELVRVSTTDMFPQGVHVETVCLLSRKDK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaattccgtaaaaacgatatactcactttagatatagaggattgcggagttgacggt
gaaggtatcgggaaagccgatggcttcaccgtttttgtgaaagacgccgtgatcggagac
cggatcaaagccaagatcatcaaggcaaaaaagaactatggctatggccgtctgatggag
gtgatcacaccgtctccataccgtgtgaaacctgcctgctccattgcccgccagtgcgga
ggatgccagcttcaggcattatcctacgagcagcagctgaaatttaaagagaaaaaggtt
cgtggacatctggaaaggatcggaggttttcagaatcttgatatggaaccgatcatgggg
atggaagacccctatcattatcgaaacaaggcacagtttccggtaggaaaaaataaagac
ggaaagatcatcacaggcttttatgcaggaagaacccactccatcattgataaccgagaa
tgtattctgggagtgaaacagaataaagaggttttggaccgtgtgatcggacacatggaa
aaatatcatgtacagccttacgatgaggccacgggaaaaggtcttgtacgtcatattatg
attcgttacggcttccatacagatgagatgatggtctgtctgatcttaaacggagataag
atccctgcagaaaaggctctggtggaatcactctgtgaaattccggaaatgaccagcatt
accatcaatgttaataaaaaacggaataatgtgattctgggtgatcagcttcgcctcctt
tggggacagtcctatataacggacagcatcggagatatttcctatcagatttctcccctg
tcctttttccaggtcaatcccatccagaccgaaaaactgtatggaaaggctctggagtac
gccggccttacgggaaatgaaactgtctgggatctgtactgcggaatcggaactatctcc
ctgttcctggcccagaaagcaaaatttgtccgcggcgtggagatcgtaccacaggccatt
gacaatgcaagagagaatgcgaagctcaatggcattgagaatgtagagttttttgtcgga
aaagcagaggaagtgctgccgagagagtatgagaagaatggcgtttatgcagacgttatc
gtggtagacccgccacggaaaggctgtgatgaggtacttctgaatacgatccttaaaatg
aagccggagagggttgtgtatgtgagctgtgacagtgcgacactggcgagggatctgaag
gtgctgtgtgcggaggattatgaactggtgcgggtttctactactgatatgtttccgcag
ggagtccatgtcgagacggtttgtttgctgtcaagaaaagataaataa
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