Blautia massiliensis: LK422_12890
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Entry
LK422_12890 CDS
T08787
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bmas
Blautia massiliensis
Pathway
bmas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LK422_12890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmas03021
]
LK422_12890
03400 DNA repair and recombination proteins [BR:
bmas03400
]
LK422_12890
Enzymes [BR:
bmas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LK422_12890
Transcription machinery [BR:
bmas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LK422_12890
DNA repair and recombination proteins [BR:
bmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LK422_12890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Hpr_kinase_C
MukB
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UEA27983
LinkDB
All DBs
Position
complement(2700202..2701161)
Genome browser
AA seq
319 aa
AA seq
DB search
MFDFNKPKIEITEISEDKKFGRFVVEPLERGYGTTLGNSLRRIMLSSLPGAAVSQVKIDG
VLHEFSSIPGVKEDVTEIIMNLKSLAIKNHSSDNEPKTAYIECEGKGVVTAADIQADQDI
EIMNPDQVIATLNGGKDCRLAMELTITKGRGYISADKGKTDDMPIGMIAVDAIYTPVDRV
NMIVENTRVGQVTDFDKLTLDVYTNGTLDPDEAVSLAAKVLSEHLNLFIDLSENAKTAEV
MIEKEDNEKEKVLEMSIDELELSVRSYNCLKRAGINTVEELCNKTSDDMMKVRNMGRKSL
EEVLAKLKELGLQLQPTEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgatttcaataaaccaaaaatcgaaattaccgaaatatccgaagataagaagttt
ggaagattcgttgtagagcctctggaaagaggttatggtactacccttggcaattcttta
agaagaattatgctgtcctcccttccgggagctgcagtaagccaggtgaagatcgatggt
gtacttcatgaattcagctccattccgggcgtgaaggaagatgtgaccgaaatcatcatg
aatctgaaatctcttgccattaagaatcacagcagtgacaatgagccgaagaccgcatac
attgagtgtgagggcaaaggtgttgttacagcagctgatatccaggcagatcaggatatt
gagatcatgaacccggatcaggtgattgcaaccctgaacggtggaaaagactgcagactg
gccatggagcttaccattaccaagggacgtggctatatcagtgcagacaaaggcaaaacc
gatgacatgccgatcggtatgattgcagtggatgcgatctacacaccggtagacagagtc
aacatgatcgtagagaatacacgagttggtcaggtaactgacttcgacaagcttacactg
gatgtatataccaatggaacacttgatccggatgaggcagtcagccttgcagcgaaggtt
ctcagcgagcatttaaacctgttcattgatctttccgagaatgctaagaccgcagaggtt
atgatcgagaaagaagacaatgagaaggaaaaggttctggagatgagcattgatgagctt
gagctctctgttcgttcctacaactgccttaagagagccggtatcaatacggttgaagaa
ttatgcaacaagacttctgacgatatgatgaaggttcgtaatatgggccgcaaatcctta
gaggaagtacttgcaaaactcaaagagctgggacttcagctccagcctacagaggaataa
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