Blautia massiliensis: LK422_13400
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Entry
LK422_13400 CDS
T08787
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bmas
Blautia massiliensis
Pathway
bmas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK422_13400 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmas03019
]
LK422_13400 (recQ)
03400 DNA repair and recombination proteins [BR:
bmas03400
]
LK422_13400 (recQ)
Enzymes [BR:
bmas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK422_13400 (recQ)
Messenger RNA biogenesis [BR:
bmas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LK422_13400 (recQ)
DNA repair and recombination proteins [BR:
bmas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LK422_13400 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UEA28075
LinkDB
All DBs
Position
complement(2800845..2802674)
Genome browser
AA seq
609 aa
AA seq
DB search
MTKQELLKTHFGYDTFREGQEAVIDALLAGKDVLAVMPTGAGKSICYQVPALMMKGITLV
ISPLISLMKDQVRSLNQVGISAAYLNSSLTQGQYFTALRYAKAGRYPIIYVAPERLTTEA
FLDFALSADISMIAVDESHCVSQWGQDFRPSYLKIAEFVAQLPKRPVIGAFTATATKEVR
EDIARLLGLQDPFCTTTGFDRENLYFAVKTPKDKYKEVHDYILEHPDDSGIIYCLTRKLV
EEVCGKLIRDGITATRYHAGLSDEERRNNQDDFIYDRCRVMVATNAFGMGIDKSDVRYVI
HYNMPKNMEGYYQEAGRAGRDGDPAECILLYSGKDVVTNQYLIERGQDNQEMEAAAWRLV
RERDQERLKQMTFYCFTHDCLREYILKYFGEYGKSYCGNCLNCQTEFEEQDVSQEARAMI
RCVESSGQRYGVNVILDTLRGASTAKIRQYEMDGNPEYGVCAKIPAHRLRQIFNYLVLKE
YLHLTDDGYTIVKLTAASRSFLEEEHILTMKMSKELETKKKEKRSRLPKSAVGELGEQDE
PLFQKLRALRLEIAREEKIPPYMVFSDKTLIHMCILKPGNEEEMLNVTGVGRHKYEKYGK
RFIDAVKKL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacaggaacttttaaagacccatttcgggtatgatacattcagagaagggcag
gaagcggtgatcgatgcgcttcttgcaggaaaagatgttctggcagtgatgccaaccggc
gcaggaaaatcaatctgctatcaggtaccggcactgatgatgaaggggatcacactggta
atatcaccgttgatctcccttatgaaggatcaggtgagaagcctgaaccaggtcggtatc
tcagcagcatacctcaacagctctctgacgcaggggcagtatttcacagccttgcgctat
gcaaaggcaggacgatatccgatcatctatgtagcaccggagaggcttaccacagaggcg
tttctggattttgcgctgagcgcggatatttccatgatcgcagtggatgagtcacactgt
gtatcacagtggggacaggattttcggccaagctatctgaagatcgcagagtttgtggca
cagcttccaaaaagaccggtgatcggtgcatttacagctacagctacgaaggaggtcagg
gaggatattgcaagacttctggggcttcaggatcccttttgcacaaccacaggatttgac
cgggaaaacctttattttgcagtgaaaacaccgaaagataaatataaggaagtacacgat
tacatactggagcatccggacgacagtggaatcatctactgtctcaccagaaagctggtg
gaggaggtctgcggaaagctgatccgtgacggcatcacggccaccagatatcatgcagga
ctttccgatgaggaacgccggaacaatcaggatgattttatttatgaccgctgtcgtgtg
atggtagccaccaatgcatttggaatgggaatcgacaagtccgatgtgcgttatgtcatt
cattataatatgccgaagaacatggaaggctattatcaggaagcaggccgtgcgggccgt
gacggcgatcctgcggaatgtatcctgctttacagcgggaaggatgtggttaccaatcag
tatcttatcgagagaggacaggataaccaggaaatggaagcggcagcctggcgccttgtc
cgggagcgtgatcaggagaggctgaagcagatgaccttttactgctttacccatgattgt
ctgcgtgagtacatcctgaaatattttggggaatacggaaaaagctactgcggaaactgc
ctgaactgccagaccgagtttgaagagcaggatgtgagccaggaggccagggcaatgatc
cggtgcgtggaaagcagtggtcagagatacggagtgaacgtgatcctggatactctgcgc
ggcgcatctacggcgaagatccggcagtatgagatggatggaaacccggaatatggagtc
tgtgcaaagattccggcacaccggctacggcagatctttaattatctggtactgaaggaa
tatcttcatctgacggatgacggatatacgattgtgaagctgaccgccgcttccaggtca
tttctggaggaggagcatatcctcacaatgaaaatgtcaaaagagctggagacgaagaaa
aaagagaaacggagcagacttccgaaatctgcagtcggggagctgggagaacaggatgag
cccctttttcagaagcttcgtgctcttcgcctggaaatcgccagagaggaaaaaattccc
ccttatatggtcttttccgacaaaacccttatccatatgtgcattctaaagcctggaaac
gaggaggaaatgctgaatgtgacaggagtcggcaggcacaagtacgaaaaatacggaaaa
aggtttatagatgcggtgaaaaagctgtag
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