Blautia massiliensis: LK422_15300
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Entry
LK422_15300 CDS
T08787
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bmas
Blautia massiliensis
Pathway
bmas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LK422_15300 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmas03021
]
LK422_15300 (rpoC)
03400 DNA repair and recombination proteins [BR:
bmas03400
]
LK422_15300 (rpoC)
Enzymes [BR:
bmas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LK422_15300 (rpoC)
Transcription machinery [BR:
bmas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LK422_15300 (rpoC)
DNA repair and recombination proteins [BR:
bmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LK422_15300 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
UEA28421
LinkDB
All DBs
Position
complement(3242391..3246089)
Genome browser
AA seq
1232 aa
AA seq
DB search
MAETTNANETYQPMTFDAIKIGLASPEKIREWSHGEVLKPETINYRTLKPEKDGLFCERI
FGPSKDWECHCGKYKKIRYKGVVCDRCGVEVTKSAVRRERMGHIELAAPVSHIWYFKGIP
SRMGLILDISPRTLEKVLYFANYIVLDPADSGLMYKQVLTEREYQEARESYGEGFRVGMG
AESIMELLQAIDLEKDSEELKAELVDATGQKRARIIKRLEVVESFRESGNRPEWMIMTVI
PVIPPDLRPMVQLDGGRFATSDLNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEA
VDALIDNGRRGRPVTGPGNRALKSLSDMLKGKSGRFRQNLLGKRVDYSGRSVIVVGPELK
IYQCGLPKEMAIELFKPFVMKELVANGTSHNIKNAKKMVEKLEPAVWDVLEDVIKEHPVM
LNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSQEAQAECRF
LLLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPGNKGEGKFFKSVNEAILAYENKVI
TLQTKIIVHCHKTMPDGTVLSGNVQSTLGRFLFNEILPQDLGFVDRSVPGNELLLEVDFL
VGKKQLKQILEKVINTHGATKTAEVLDSVKSMGYKYSTRAAMTVSISDMTVPPQKPEMIK
QAQDTVDRITKNYKRGLITEEERYKEVVDTWKKTDDELTKALLTGLDKYNNIFMMADSGA
RGSDKQIKQLAGMRGLMADTTGHTIELPIKSNFREGLDVLEYFMSAHGARKGLSDTALRT
ADSGYLTRRLVDVSQDLIVREADCCENRAEISGMVVRGFMDGKEEIESLQERITGRFSCE
TVKNKDGEILVKANHMITPKRAARIMKEGVSNQTGGPIDKLKIRTILSCKCKVGVCAKCY
GANMATGEPVQVGESVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEAR
KPKGLAIITEIPGVATINDTKKKREIIVNDPETGDSKTYLIPYGSRIKVLDGQVLEAGDE
LTEGSVNPHDILRIKGVRAVQDYMIREVQRVYRLQGVEINDKHIEVIVHQMLKKIRIEDN
GDTEFLPGTLVDVLDVEEVNEKLEAEGKQPAEGKQVMLGITKASLATNSFLSAASFQETT
KVLTEAAIKGKIDPLIGLKENVIIGKLIPAGTGMKRYSEISLDTGMPEVKTASEEPEDTE
EISVEEEKTETAPEEETIAVEETAEETAPVEE
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacaaccaacgccaatgaaacatatcagccaatgactttcgatgccatcaag
atcggactggcgtcccctgagaagatcagagagtggtcacacggtgaggttttaaaacct
gaaacgatcaactacagaaccttgaagcctgagaaggatggtcttttctgtgaaaggatt
ttcggaccgagcaaggactgggagtgccactgtggaaagtacaaaaaaattcgctataaa
ggcgttgtctgcgacagatgcggtgttgaagtaaccaaatctgccgttcgtagagagcgt
atgggacacatcgagcttgcagctccggtgtctcatatctggtactttaaaggaattccg
tcccgtatgggtctgatccttgatatttctccgagaacactggagaaagtgctttacttt
gctaactatatcgttctggatcctgcagattccggacttatgtacaaacaggtactcacc
gagcgtgagtaccaggaagcacgtgagtcttacggagaaggattccgtgtaggtatgggt
gccgagtccatcatggagctccttcaggctatcgatcttgaaaaggattccgaagaactg
aaggcagagcttgtggatgcaacaggccagaaacgtgcaaggatcatcaaacgtcttgag
gttgtggagtccttccgtgagtccggcaaccgtcctgagtggatgatcatgaccgttatc
ccggttatcccgccggatcttcgtcctatggtacagctggacggaggacgttttgcaaca
tctgacctgaatgatctttacagaaggatcatcaacagaaacaaccgtctgaaaagactt
ctggagcttggtgctccggatatcattgtccgcaacgagaagcgtatgctgcaggaggct
gtagatgccctgatcgataacggacgccgtggacgtcctgtaacaggccctggaaacaga
gctctgaaatccctttccgatatgctgaagggtaaatccggacgtttccgtcagaacctt
ctcggtaaacgagttgactattccggacgttctgtaatcgtcgtaggacctgaactgaag
atctatcagtgtggtcttccgaaggagatggctatcgagctgttcaaacctttcgttatg
aaagagcttgttgccaacggaacttcccacaacatcaaaaatgccaagaaaatggtagag
aagcttgagccggcagtatgggatgtccttgaggacgtcattaaggagcatccggttatg
ctgaaccgtgcacctacactgcatcgtctgggtatccaggcattcgagccgatccttgta
gaaggtaaggcgatcaagcttcatccgcttgtttgtaccgcgttcaacgctgacttcgat
ggtgaccagatggctgtacatcttccgctttcccaggaagcacaggcagagtgccgtttc
cttctgttatcaccgaacaaccttctgaaaccgtcagatggtggtcctgtagccgttcct
tcacaggatatggtccttggtatctactacctgacacaggaaagacctggaaacaagggt
gagggcaagttctttaagagtgtcaacgaggcaattcttgcatatgagaacaaggtcatc
acactccagacaaagatcattgtccattgtcataagacaatgccggacggaactgtttta
agcggcaatgttcagtccacactgggacgtttcctgttcaacgagatccttccgcaggac
cttggatttgtggacagaagcgtacctggaaacgaactgcttcttgaggttgatttcctt
gtaggtaagaaacagctgaagcagatccttgaaaaggttatcaatactcacggtgcaaca
aagacagccgaggtacttgactccgttaagtctatgggttacaaatactccacacgtgca
gccatgaccgtatctatttccgatatgaccgtgccgccgcagaagccggagatgatcaag
caggctcaggatactgttgaccgtatcacaaagaactacaaacgtggtcttatcacagag
gaagagcgttacaaagaggttgttgatacctggaagaagaccgatgatgagcttacaaag
gcacttcttacaggtcttgataagtacaacaacatcttcatgatggctgactccggagcc
cgtggttccgataagcagatcaaacagcttgccggaatgcgaggactgatggctgataca
accggtcataccatcgagctcccgatcaagtcaaacttccgtgaaggtcttgacgtactg
gagtacttcatgtccgctcatggagctcgtaaaggtctttctgataccgctcttcgtaca
gccgattccggatacctgacaagacgacttgttgacgtatcccaggatctgatcgttcgt
gaggcggactgctgtgagaacagagcagagatctccggtatggtcgttcgtggattcatg
gacggaaaagaagagatcgagagccttcaggagcgtatcacaggacgtttctcctgtgag
acagttaagaataaagatggagaaatccttgttaaagcaaaccacatgatcacaccgaag
cgtgcagcccgtatcatgaaagagggcgtaagcaaccagacaggcggaccgattgacaaa
ctgaagatccgtaccatcctttcctgtaagtgcaaggttggtgtctgcgcaaaatgttat
ggtgcgaacatggctaccggtgagccggtacaggttggtgagtctgttggtatcatcgca
gcacagtctatcggtgagccaggtacacagctgaccatgcgtactttccataccggtggt
gttgccggtggagatatcacacagggtcttcctcgtgtcgaggagcttttcgaggcaaga
aagccgaagggtcttgcgatcatcacagagatcccaggtgttgccacgatcaacgacact
aagaagaaacgtgagatcatcgtaaacgatccggagacaggcgattccaagacttacctg
atcccatacggttctcgtatcaaagtccttgacggacaggttcttgaggccggcgatgag
ctgacagaaggtagtgtaaatccgcatgatattctgagaatcaagggtgtgcgtgcagtt
caggattacatgatccgtgaggttcagcgtgtatatcgtctgcagggtgttgagatcaac
gataagcatatcgaggttatcgttcatcagatgctgaagaagatccgtatcgaggataac
ggagatacagagttcctgccaggaacacttgttgatgtccttgatgttgaggaagttaac
gagaaacttgaggcagagggcaaacagccggcagagggcaaacaggttatgcttggtatt
accaaagcatcccttgctacaaactccttcctgtcagcagcatccttccaggaaacaaca
aaagtcctgacagaggctgctatcaaaggtaagatcgatccgctgatcggtctgaaagag
aacgttatcatcggtaagctgattcctgcaggtacaggtatgaagcgttacagtgagatc
agtcttgacacaggaatgccggaggtaaaaacagcttccgaggagcctgaggatacagag
gaaatttccgtagaggaagagaagactgagactgctccggaggaagagaccattgctgtt
gaagagacagcagaggaaactgcaccggtagaagaataa
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