Borreliella mayonii: A7X70_03130
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Entry
A7X70_03130 CDS
T04886
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bmay
Borreliella mayonii
Pathway
bmay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7X70_03130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmay03400
]
A7X70_03130
Enzymes [BR:
bmay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7X70_03130
DNA repair and recombination proteins [BR:
bmay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
A7X70_03130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
UvrB_inter
CarD_TRCF_RID
ResIII
UB2H
NdhM
Cas3-like_C_2
AAA_22
POTRA
CHD1-like_C
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
APS98806
UniProt:
A0AAC9KWA0
LinkDB
All DBs
Position
complement(651184..654558)
Genome browser
AA seq
1124 aa
AA seq
DB search
MNIDEELTRILENNSNLKKMKEFLEQNTFFSLTGYEGFFKAFLIKKIKEYSKTGKIILIV
KDEYTLDKIKNDLQIITNQIFELNYFSPLVYKGIGSKSTIFNERIKFLINFYKKNPGIYI
AVLKSLLSKIPDKNTLLKNIYKIKKNTNINTEDIEKTLITLGYEKTLRVTIPGEFTIKGE
IIDLYPFGEQNPIRIVLNFNKIEEIKKFNPLTQLKQDDEILEFQIPPKKEIIWNDEAINT
LKTKIKSIEYKNILEELNLKKETKTEEMFYPLVANTYLIDEIEKQTPIVNFEINNLEKEI
EKIHQEYEKLYKEAKEVGKNIINPKKILLNSKTFNLKSNVLFSKIKSPKSKEIIEFKIES
ERNFFSNIALTKEEFENWLKNGFKIIIAAESESQKEKLKYIFKELPKVLIEVLKISSSLI
IEKEKIAIILESNIFNTGQKINKVFESSKTKAIDSFVEIEKNSHVVHINHGIGIFRQIKR
IKTSSLEKDYIEIEYAEGERLFIPIEQTNLIQKYIGSDPKNIKLDKIGSKTWIKNKANAK
KRIKEIADKLIELYSKRESIKGIKYPEDNELQLLFESEFPYDETPDQITAIKEIKGDMMS
FKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVIVLSPTTILAEQHFNTFKKRFKNFPI
KIEVLSRFIKNNTENRILKELKSGEIDIIIGTHKILSKKFTCKNLGLIIIDEEQRFGVKE
KEKLKEIRISVDCLALSATPIPRSLHMSLIKLRDISVLKIPPKNRVKIEAYLESFSELLI
KHAIESELSRNGQVFLVNHNIEELYYLKTLIEKLTPYARIAIIHGKLTGDEIENIMHNFI
KKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQD
SEKLNERSIERLRAITEFSDLGSGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTM
LNKAIEKKMGKASSEKEVDIEINYSGFIPDNYAKNEQDKILIYKKIFEIQTEEESKKIRS
ELSNNFGPIPKEINSLLMLAELKILAKDLNITKLKETNRTLEIEYKNIESIPMGKIIEIL
KKHPNLLILNPSYQKSIFLSFKNIEKSDKINYIYKNINLLKTDT
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagatgaagaactaacaagaatattagaaaataattccaatttaaaaaaaatg
aaagaatttttagaacaaaatacatttttttcattaacaggatatgaaggatttttcaaa
gcctttttaattaaaaaaatcaaagaatatagtaaaactgggaaaataatattaatagtt
aaagacgagtacacattagataaaattaaaaatgatttacaaataattacaaatcaaatc
tttgagcttaactattttagcccccttgtatacaagggtattggctctaaaagtacgatc
tttaacgaaagaatcaaattcttaatcaatttttataaaaaaaatcctggaatatatatt
gcagtcttaaaatcattgcttagcaaaatacctgataaaaatacattactaaagaatata
tataaaattaaaaaaaataccaatattaatacagaagacattgaaaaaactcttataaca
ttgggatatgaaaaaacactaagagtaacaattccaggagaatttacaataaaaggagaa
attatagatctatacccttttggagaacaaaatccaataagaattgtactaaattttaac
aaaatagaagaaataaagaaattcaatcccttaacccaactaaaacaagatgatgaaatt
ttagaattccaaattcctccaaaaaaagaaattatttggaacgatgaagctattaacacc
ttaaaaacaaaaattaaatctattgaatataaaaatattcttgaagagttaaatttaaaa
aaagaaacaaaaacagaagaaatgttttatccactagtagcaaatacctacttaattgat
gagattgaaaaacaaacacctattgtaaattttgaaattaataatttagaaaaagaaatt
gaaaaaatacaccaagaatacgaaaagctttataaagaagcaaaagaagtcggtaaaaat
ataattaatcctaaaaaaattctcttaaattctaaaaccttcaatctaaaaagcaacgtt
ttattttcaaagattaaaagccctaaatccaaagaaattatagaatttaaaatcgaaagt
gagaggaactttttttcaaatatagcgcttacaaaagaggaatttgaaaattggctaaaa
aatggatttaaaatcattattgcagcagaatctgaatcgcaaaaagaaaaacttaaatat
attttcaaagaattaccaaaagtattaattgaggttttaaaaatatctagctctttaata
atagaaaaagaaaaaattgccattattcttgaatcaaacattttcaatacgggacaaaaa
ataaacaaagtatttgaatcttcaaaaacaaaagctattgactcctttgttgagattgag
aaaaatagccatgtagttcacataaaccatggaattggtatatttaggcaaataaagaga
ataaaaaccagctctcttgaaaaggattatattgagattgaatacgctgaaggagaaagg
ttatttattccaattgaacaaacaaatttaattcaaaaatacattggaagtgatcctaaa
aatatcaaattagataaaattggttctaaaacatggataaaaaacaaagcaaacgcaaaa
aaaagaatcaaagagattgcagacaaattaatagagctttattcaaaaagagaaagcatt
aaaggtattaaatacccagaagataacgaattacaattgttatttgaatctgaatttcca
tacgatgaaactccagatcaaataacagcaataaaagaaataaaaggagacatgatgagc
ttcaaagtgatggatcgccttctttgtggagatgttggatttggaaaaactgaagttgcc
atgagagccgcttttaaagctgtaatgggaaacaaacaggttattgtactctcgccaaca
actatcttagcagaacagcattttaatacattcaaaaaaagatttaaaaattttccaatc
aaaatcgaagtattaagcagatttataaaaaataacacagaaaaccgaattttaaaagaa
ttgaaaagcggggaaattgatataatcataggaacacacaaaattctttcaaaaaaattc
acctgcaaaaatttaggattaataataattgatgaagagcaaagatttggtgtaaaagaa
aaagaaaagcttaaagaaataagaatttcagttgattgtcttgctctttctgcaacacca
attcccagatctcttcacatgtccctaattaagcttagagatatttctgttttaaaaatt
ccacctaaaaacagagtaaaaatagaggcttatttagaatcgtttagcgaacttttaata
aaacatgcaattgaaagcgaactatctcgaaatggtcaagtttttttagtaaatcataat
attgaagaactgtattatttaaaaacgctcattgaaaaattaactccttatgcaagaatt
gcaataattcatggaaaacttacaggagacgaaattgaaaatataatgcacaattttatt
aaaaaagcgtatcaaattttattggcaacaacaataattgaaaatggaatagacattcca
aatgcaaatacaataataataaacaatgcaaacaagtttggacttgcacagctatatcaa
ctaaaaggaagggttggaaggggatctaaaaaagcttatgcttattttttataccaagat
agcgaaaagctaaatgaacgctctattgaaagactaagagcaataaccgaattttcagat
ctaggatcaggatttaaaatagcaatgaaagatatggaaataaggggtgttggaaatttg
cttggaagagaacagcatggagaaattgagtcgattggattggattactatctaacaatg
ctaaataaagcaattgaaaagaaaatgggaaaagcctcatcagaaaaagaagttgatatt
gaaattaactatagcggctttattcctgacaattatgcaaaaaatgaacaggataaaata
ctaatctacaaaaaaatctttgaaattcaaactgaagaagaaagcaaaaagataagatca
gaactcagcaacaactttggcccaatacctaaagaaataaatagtttgttaatgttagct
gaacttaaaattttagcaaaagatttaaacataacaaaattaaaagaaacaaacagaacc
ttggaaatagaatataaaaatatagaaagcatccctatggggaaaataatagaaatactt
aaaaaacatcctaatttattaatattaaatccctcgtatcaaaaatcaatatttttaagc
tttaaaaatattgaaaaatctgacaaaataaattacatatataaaaatattaatttacta
aaaacagacacatag
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