KEGG   Burkholderia mallei NCTC 10247: BM44_2053
Entry
BM44_2053         CDS       T03524                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bmaz  Burkholderia mallei NCTC 10247
Pathway
bmaz02024  Quorum sensing
bmaz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmaz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BM44_2053 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BM44_2053 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmaz03019]
    BM44_2053 (hfq)
   03036 Chromosome and associated proteins [BR:bmaz03036]
    BM44_2053 (hfq)
Messenger RNA biogenesis [BR:bmaz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BM44_2053 (hfq)
Chromosome and associated proteins [BR:bmaz03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BM44_2053 (hfq)
SSDB
Motif
Pfam: Hfq Mucin-like LSM Hfq_1 SelB_WH1 EDC3_N
Other DBs
NCBI-ProteinID: AIS30460
LinkDB
Position
1:complement(2285946..2286590)
AA seq 214 aa
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGSREPRGDGGYGAREPREPREPRESYGAP
QEGASTPSGTQERNGNGPVIVTRRRRSLGPTDGQ
NT seq 645 nt   +upstreamnt  +downstreamnt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgtggcgacggcggctacggttcccgcgaaccgcgtggcgacggc
ggctatggcgcgcgcgagccgcgtgaaccgcgcgagccccgcgagtcttacggcgcgccg
caagaaggcgcatcgacgccgtccggcacgcaggaacgcaacggcaacggcccggtgatc
gtcacgcgccgtcgccgttcgctcggcccgaccgacggccaataa

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