Burkholderia mallei NCTC 10247: BM44_2053
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Entry
BM44_2053 CDS
T03524
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bmaz
Burkholderia mallei NCTC 10247
Pathway
bmaz02024
Quorum sensing
bmaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM44_2053 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BM44_2053 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmaz03019
]
BM44_2053 (hfq)
03036 Chromosome and associated proteins [BR:
bmaz03036
]
BM44_2053 (hfq)
Messenger RNA biogenesis [BR:
bmaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BM44_2053 (hfq)
Chromosome and associated proteins [BR:
bmaz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BM44_2053 (hfq)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hfq
Mucin-like
LSM
Hfq_1
SelB_WH1
EDC3_N
Motif
Other DBs
NCBI-ProteinID:
AIS30460
LinkDB
All DBs
Position
1:complement(2285946..2286590)
Genome browser
AA seq
214 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGSREPRGDGGYGAREPREPREPRESYGAP
QEGASTPSGTQERNGNGPVIVTRRRRSLGPTDGQ
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgtggcgacggcggctacggttcccgcgaaccgcgtggcgacggc
ggctatggcgcgcgcgagccgcgtgaaccgcgcgagccccgcgagtcttacggcgcgccg
caagaaggcgcatcgacgccgtccggcacgcaggaacgcaacggcaacggcccggtgatc
gtcacgcgccgtcgccgttcgctcggcccgaccgacggccaataa
DBGET
integrated database retrieval system