Priestia megaterium DSM 319: BMD_0126
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Entry
BMD_0126 CDS
T01219
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMD_0126 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmd03021
]
BMD_0126 (rpoB)
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_0126 (rpoB)
Enzymes [BR:
bmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMD_0126 (rpoB)
Transcription machinery [BR:
bmd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMD_0126 (rpoB)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMD_0126 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ADF37067
UniProt:
D5D9P7
LinkDB
All DBs
Position
115841..119404
Genome browser
AA seq
1187 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTASYQWFLDEGLREMFQDISPIDDFTG
NLSLEFIDYSLGEPKYSVGESKERDVTYAAPLRVKVRLINKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKLDKNGKKGYTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTETTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKHRLFNQKLAETLVDPETG
EIIAEKGAMIDRRLLDRLIPMLEGGVNFKTYSPVGGVVEDDVTLQSIKIYAPNDPEGEKI
ITVSGNAYVTEEVKNITPADILASISYFFNLLHQVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPLGEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNKF
GFIETPYRRIDPETGKVTERIDYLTADEEDNYVVAQANARLGDDGSFLDENVVARFRGEN
TVIRRDRLDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLNPEAPIVGT
GMEYVSGKDSGAAVICKYPGVVERVEAKQIFVRRYEEVDGQKVKGNLDQYKLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMEKGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSVHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHLGMAARKLGIHVASPVFDGAREEDVWATIEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGIPESFKVLIKELQSLGM
DVKMLSADEQEIDIMDSEEDHEQPTESIIADNEESLSEGQKDPVTKE
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgccaccgccaacgcagaagttatgctcgtatt
agtgaagttttagagttaccgaacttaatcgagattcaaacggcttcataccaatggttt
ttagatgaaggtttacgagaaatgttccaagatatttctccaattgatgattttacaggt
aacttatcactagaatttattgattacagcttaggtgagccaaagtattcagtaggagag
tccaaagaacgtgatgtaacttatgcagcacctcttcgtgttaaggtgcggttaattaat
aaagaaacaggtgaagtaaaagaccaagatgtgttcatgggagatttcccattgatgacc
gaaacaggtacctttgtaattaatggtgctgagcgtgttatcgtatcacagttggttcgt
tcaccaagtgtttactatagtggaaagcttgataaaaacggtaaaaaaggatatacagca
actgttatccctaaccgtggtgcatggctagaatatgaaactgatgcaaaagatgtagta
tacgtgcgtattgatcgtactcgtaaactgccagtaacagtgctgttacgcgcgctaggt
ttcggttctgaccaagagattatcgatttaatcggtgataatgaatacatccgtaatacg
cttgaaaaagataatacggaaacaacggaaaaagcgctattagaaatctatgagcgttta
cgtccgggtgaaccaccgacagttgagaatgcgaagtctctattagtatctcgcttcttt
gatccaaaacgatatgacttagcgaacgtaggtcgctataaaattaataaaaagcttcat
atcaaacatcgcttatttaatcaaaagctagctgaaacattagttgatcctgaaacaggt
gaaattattgcagaaaaaggcgcaatgattgaccgccgtctgctagatcgcttgattccg
atgcttgaaggtggagtaaacttcaaaacttatagtccggttggtggagtagtagaagac
gatgttacattacaatctattaagatttatgcgccaaatgatccagaaggtgaaaaaatc
atcactgtatcaggtaacgcatatgtaacagaagaagttaaaaatatcacacctgctgat
attttagcatctatcagttacttctttaacttgcttcatcaagtaggagacacagatgat
atcgaccacttaggtaaccgtcgtctgcgttctgtaggtgaattgttacaaaaccaattc
cgtatcggtttatctcgtatggaacgtgttgttcgtgaaagaatgtcaattcaagacacg
aatacaatcacacctcaacaattaattaatattcgcccagttattgcggcgattaaagag
ttctttggaagttctcaattatcacagttcatggatcaaacgaatccattaggcgaattg
acgcacaaacgtcgtctttcagctctaggacctggtggtttaacgcgtgagcgcgctggt
ttcgaagtgcgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcca
gagggtccgaatatcgggttaatcaactcactatcttcttatgcaaaagtaaacaaattc
ggtttcatcgaaacaccttaccgtcgtatcgatcctgaaacaggtaaagtgacagagcga
attgattacttaacagctgatgaagaagataactatgttgtagcccaagcgaacgctcgt
ctaggtgatgatggttcattcttagatgaaaatgtcgttgcacgtttccgtggagaaaac
acggttatccgtcgcgatcgtttagattatatggatgtatcaccaaaacaagttgtatct
gccgctacagcatgtatcccattcttagagaacgatgactctaaccgtgcattaatgggt
gcgaacatgcaacgtcaagcagtacctttattaaatcctgaagcaccaatcgtaggtaca
ggtatggaatatgtatctggtaaagactctggtgcagccgtgatttgtaaatatcctggc
gttgtagagcgcgtagaagcgaaacaaatttttgttcgccgctatgaagaagtagacgga
caaaaagttaaaggtaacttagatcaatacaaattattaaaatttgttcgttctaaccaa
ggtacttgttacaaccagcgtccaattgtttcagttggcgacgaagtagtaaaaggtgag
atcttagccgacggtccttcaatggaaaaaggtgagcttgctttaggacgaaacgtaatg
gttggtttcatgacatgggatggttacaactatgaggatgccatcatcatgagtgaacgc
cttgtgaaagatgatgtatatacgtctgttcatattgaagaatatgaatctgagtctcgt
gatacgaagcttggacctgaagaaattacgcgtgacattccaaacgtaggtgaagatgcg
cttcgcaacttagatgaacgtggaatcatccgcattggtgcagaagtaaaagacggagat
cttttagttggtaaagtaacgccaaaaggtgtaacagaactaacagctgaagaacgtctt
ctacacgctatcttcggtgaaaaagcgcgtgaagttcgtgatacttctcttcgtgtaccg
cacggcggcggtggaatcattcttgatgttaaagtcttcaaccgtgaagatggcgacgaa
ttaccaccaggtgtaaaccaattagtccgtgtatatattgttcagaagcgtaaaatttct
gaaggtgacaaaatggccggtcgtcacggtaacaaaggtgtaatttcacgtattttacct
gaagaagatatgccttatctaccagacggtacgccaattgacatcatgttaaacccatta
ggggtaccatctcgtatgaacatcggtcaggtgctagagcttcatttaggtatggctgct
cgtaagcttggcattcacgttgcgtctccagtatttgatggtgcgcgtgaggaagatgtt
tgggcaacaatcgaagaagctggcatgtctcgtgatgctaaaacagttctatatgatggt
cgaacaggtgaaccattcgataaccgtgtatcagtaggaatcatgtacatgatcaaactt
gctcacatggtagacgataaacttcacgctcgttctactggaccatactcacttgttaca
caacaaccacttggtggtaaagcgcagttcggtggacagcgttttggtgagatggaggta
tgggcacttgaagcatacggtgctgcttacacattgcaagagatcttaacagtgaaatca
gatgacgtagtaggtcgtgtgaaaacatacgaagcaattgttaaaggtgaaaacattcca
gaacctggcatacctgaatcgttcaaagtattaattaaagaactacaaagtttaggtatg
gatgtgaagatgctttctgctgacgagcaagaaattgatatcatggactcagaagaggac
catgagcaaccaacagaatcaattattgctgataacgaagaaagcctttctgaaggacaa
aaagatcctgtcacaaaagagtaa
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integrated database retrieval system
