Priestia megaterium DSM 319: BMD_0127
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Entry
BMD_0127 CDS
T01219
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMD_0127 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmd03021
]
BMD_0127 (rpoC)
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_0127 (rpoC)
Enzymes [BR:
bmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMD_0127 (rpoC)
Transcription machinery [BR:
bmd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMD_0127 (rpoC)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMD_0127 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ADF37068
UniProt:
D5D9P8
LinkDB
All DBs
Position
119467..123060
Genome browser
AA seq
1197 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDAGDTPLEKKQLLSEKEYRAYREKYGQTFHAAMGAEAVKKLLH
DIDLDKEVDALKEELKTAQGQRRTRAIKRLEVLEAFRHSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREEAVGEGMVFKDTNEALLAYQNGYVHLHTRVGVY
AGSLNNETFTEAQNQQLLVTTVGKLVFNEILPKSFPYINEPTRENLEVKTPEKYFVEKGA
DVKEFIKNQPAIAPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLGEKEVILTEAQAKVDNVLKQFRRGLITEDERYERVISVWSSAKDVIQGKLMASL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGILAVAIKEGTEEIEKLD
ERLIGRYARKTLLHPGTNEVLVKENELITEDLAETIVDAGVEEVWIRSAFTCNTRHGVCK
KCYGRNLATGSEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIEGTIAGISEGRDRQHEITVQGEIETRSYTAPYSARLKVIEGQRIAR
GQELTEGSIDPKELLKVKDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
MDSGDTDVLPGSLLDIHQFTDANEKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMTRYRNAEPIKNQAEETVTID
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataactttgagtatatgaaaatcggtctagcttcgccagataaaatt
cgttcttggtcgtacggtgaggtaaaaaaacctgaaacgatcaactatcgtacgttaaaa
cctgaaaaagacggcttattctgtgagcgtatttttggtccacaaaaagactgggaatgt
cactgcggaaaatataagcgcgttcgttataaaggtgttgtatgtgatcgttgcggcgta
gaagttacgcgcgcaaaagttcgtcgtgaacgcatgggtcatatcgaactagctgcacct
gtttctcatatttggtactttaaaggtattcctagccgcatgggacttgtcttagacatg
tcccctcgtgcgctagaggaaatcatttattttgcttcttatgtagtaacagatgctggt
gatacaccacttgaaaagaaacagcttttatcagagaaagaataccgtgcgtatcgtgag
aagtacggacaaactttccatgcagcaatgggtgctgaagctgttaagaaattattgcat
gacatcgatcttgataaagaagtagatgctttgaaagaagaattgaaaactgctcaaggt
caacgtcgtacacgtgctattaaacgtttagaagtactagaggctttccgtcattctggt
aacgaaccttcttggatgattttagacgttctaccggttattccgccagaacttcgtcca
atggttcaattagatggtggacgctttgctacgtctgatctaaatgatttatatcgccgt
gtaattaaccgtaacaaccgcttaaagcgtttattagaccttggagctcctagcattatc
gttcaaaacgaaaagcgtatgcttcaagaagctgtagatgcattaatcgataatggtcgt
cgcggacgtccggtaacaggaccaggtaaccgtccattaaaatctctttctcacatgtta
aaaggtaagcaaggtcgcttccgtcaaaacttattaggtaaacgtgttgactactctggc
cgttcggtaatcgttgtaggtccgaacttaaagatgtatcaatgtggtcttccaaaagaa
atggcgttagagcttttcaaacctttcgtaatgaaagagcttgttgaacgcggtttagct
cataacatcaagagtgcaaaacgtaaaattgaacgcgtgcaacctgaagtatgggacgta
ttagaatcggttattaaagagcatccagttcttttaaaccgtgcaccaacgctacacaga
ctaggtattcaagcatttgaacctacgcttgtagaaggtcgcgctatccgtcttcacccg
cttgtatgtacagcatataatgctgactttgacggtgaccaaatggcggttcacgttcca
ttatctgcagaagcacaagcagaagcacgtatcttaatgcttgctgctcaaaatatcttg
aaccctaaagatggtaaaccagttgttacaccttcacaggatatggtattaggtaactac
tacttaacgcttgagcgtgaagaggcagttggagaaggtatggtgttcaaggatacaaat
gaagcactattagcgtaccaaaacggttatgtgcatcttcatacacgtgtaggtgtgtat
gcaggttctttaaacaacgaaacgtttacagaagcacaaaatcaacagttgcttgttaca
acggttggtaaattagttttcaacgaaattttaccaaaatcgttcccatacattaatgaa
ccaacaagagaaaacttagaagtgaaaactcctgagaagtactttgttgaaaaaggcgca
gatgtgaaggaattcatcaagaatcaaccggctatcgcaccgtttaagaaaaaaatctta
ggtaatattatcgctgaagtatttaaacgtttcaaaattactgagacttctaaaatgctt
gaccgtatgaaagacctaggtttcaaatattctactaaagccggtattacagttggtgta
gctgatatcgtggttttaggagaaaaagaagttatcttaacagaagcgcaagctaaagta
gataatgtactaaaacaattccgtcgcggtttaattactgaagatgagcgttatgagcgt
gttatctctgtatggagtagcgcgaaagacgttatccaaggtaaattaatggcgtcatta
gacaaacgcaacccaatcttcatgatgagtgactctggtgcccgtggtaacgcatctaac
ttcactcagcttgcaggtatgcgtggactaatggccaacccgtctggtcgtatcattgag
ttaccaatcaaatctagtttccgtgaaggtttaacagtattagagtactttatctctacc
catggtgcacgtaaaggtcttgccgatacggctcttaaaacagctgactcaggttatctt
actcgtcgtctggttgacgtggcacaagacgttatcgtacgtgatgacgactgtggtaca
gaccgcggtattctggctgttgcaatcaaagaaggaacagaagaaattgagaagcttgat
gagcgtctaattggacgttatgcaagaaaaacactacttcacccaggaacaaacgaagtg
ttagtgaaagaaaacgaactaattacagaagacctagctgaaacaattgtggatgctggt
gttgaagaagtatggattcgttctgcattcacttgtaacactcgccacggtgtatgtaaa
aaatgttacggtcgtaaccttgcaactggttcagaagttgaagtgggtgaagcagttggt
atcatcgctgctcaatctatcggtgagccaggtacacagttaacgatgcgtacattccat
acaggtggggttgctggagacgatatcactcaaggtttaccgcgtatccaagagatcttc
gaagcgcgtaaccctaaaggtcaagccgttatttctgaaattgaaggtacaattgccggc
atttctgaaggacgcgatcgtcaacatgaaattactgttcaaggagagattgaaactcgt
tcttacacagctccgtacagtgcacgtctgaaagttattgaaggacagcgcattgcacgt
ggtcaagaattaacagaaggttcaattgaccctaaagaattactaaaagtaaaagacatc
acggctgtacaagagtacttgcttcgtgaggtgcaaaaagtataccgtatgcaaggggta
gaaattggagataaacacgtagaggtaatggttcgccaaatgcttcgtaaagtgcgcgta
atggattcaggagatacagatgtattaccaggttcattacttgatattcaccaattcact
gatgcaaatgaaaaagtattacttgaaggcaatcgtccagcgacgggtcgtcctgtatta
cttggtattacaaaagcatctcttgaaactgattccttcttatctgctgcatcattccaa
gaaacaacgcgtgttcttacggatgctgcaatcaaaggaaaacgtgatgagttgcttgga
cttaaagagaatgttatcattggtaagctagttccggctggtacaggtatgacgagatat
cgtaatgctgaaccgatcaaaaaccaagctgaagaaacggtaacaatcgactaa
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integrated database retrieval system
