Priestia megaterium DSM 319: BMD_0215
Help
Entry
BMD_0215 CDS
T01219
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMD_0215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmd03019
]
BMD_0215
03009 Ribosome biogenesis [BR:
bmd03009
]
BMD_0215
Enzymes [BR:
bmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMD_0215
Messenger RNA biogenesis [BR:
bmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMD_0215
Ribosome biogenesis [BR:
bmd03009
]
Prokaryotic type
rRNA helicases
BMD_0215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADF37146
UniProt:
D5D9X6
LinkDB
All DBs
Position
193846..195357
Genome browser
AA seq
503 aa
AA seq
DB search
MALFQDLGLSQQLNKAVSKMGFEEATPIQSETIPLALEGHDLIGQAQTGTGKTAAFGIPL
IEKVDVNVDAIQGLIIAPTRELAVQVSEELYKIGQTKRVRVLSIYGGQDISRQIRALKKH
PHIIVGTPGRMLDHINRRTLRLQDVHTVILDEADEMLNMGFIEDIEKILSNVPENHQTLL
FSATMPTPIRRIAEKFMNEPKVVKVQAKEVTMPNITQYYLEVQEKRKFDILTRLLDMQSP
ELAIIFGRTKRRVDELSEALNMRGYSAQGIHGDLTQSKRLSVLRQFKEGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKMGAAMTFVTPRETGQLHNIERTTK
RKMERLTPPTLDEAMEGQQRIAADKLTESVTQGNLSYYKQLAEELLEEHDSVSLVAAAIK
LFTKEPNESPIQLTAEPPVIAKGDKNKRGNGGGRSRSNSKNYSQQNRRGNSKRFGDKRRG
GSNSSDNRNRNSSSNRKDSRSKA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttggcattatttcaagatttaggattaagtcaacagcttaataaagctgtgagtaaaatg
ggttttgaagaagcaacaccaattcaatcagaaactatcccattagcactagaaggtcac
gatttgatcggacaagcacaaacaggaacagggaaaacagcggcatttggtattcctctt
attgaaaaagttgatgtaaacgtagatgcaattcaagggttaattattgctcctactcgt
gaacttgctgtacaggtatctgaagaactttacaaaattggtcaaacaaagcgcgtacgc
gtgctatcaatttacggtggtcaagatatcagtcgtcaaattcgtgcattgaaaaagcac
cctcatatcatcgtagggacaccagggcgtatgctagatcatattaatcgtcgtacactt
cgtctacaagatgttcatacagttattttagatgaagcagatgaaatgttaaacatggga
ttcatcgaagacattgaaaaaatcttatcaaacgtacctgagaaccaccaaacactttta
ttctcagcaacaatgcctactccaatccgtcgcattgctgaaaaattcatgaacgaacca
aaagtggtaaaagtacaagcaaaagaagtaacgatgccaaacattacgcagtattattta
gaagtacaagaaaagcgtaaatttgatatccttactcgtcttttagatatgcaatcacct
gaattagctatcatctttggtcgtacaaagcgccgtgttgatgagttatcagaagcatta
aatatgcgtggttattctgcacaaggtatccatggtgacttgacgcaatcgaaacgtcta
tctgtactacgtcaatttaaagaaggttctattgatgtattagttgcaacggacgtagct
gcacgcggacttgatatttctggtgttactcatgtatacaactttgatatccctcaagat
ccagagagctatgtacaccgtatcggacgtacaggacgtgctggtaaaatgggtgctgct
atgacatttgtaacgccaagagaaactggacagttacacaatattgagcgtacaacaaaa
cgtaaaatggagcgtcttactcctccaacgcttgatgaagcaatggaaggtcaacagcgt
attgcagctgacaaattaacagaatctgtgacacaaggcaacttatcttactacaaacag
ttggcagaagagttacttgaagagcacgattcagtttcattagtggcagcagcgatcaaa
ttatttacaaaagaaccaaacgaatcaccaattcaattaactgctgaaccaccagtaatt
gcaaaaggtgataaaaacaaacgtggaaatggcggaggtcgttcacgttctaactctaaa
aactactcacagcaaaatcgtcgtggaaactcaaagcgttttggtgacaagcgtcgcggt
ggaagcaacagcagtgataatagaaatcgtaatagcagcagtaatcgtaaagattctcgc
agcaaagcgtaa
DBGET
integrated database retrieval system
