Priestia megaterium DSM 319: BMD_0642
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Entry
BMD_0642 CDS
T01219
Symbol
addB
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bmd
Priestia megaterium DSM 319
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_0642 (addB)
Enzymes [BR:
bmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMD_0642 (addB)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BMD_0642 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ADF37506
UniProt:
D5DAC7
LinkDB
All DBs
Position
598467..601967
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AA seq
1166 aa
AA seq
DB search
MGLQFLLGRSGSGKTEYLLNSMRQELLNAPLGHPLIYIVPEQMTFQSEYALVQTPGLEGM
MRAQVYSFTRLAWRILQEVGGISRYHVDQTGIHMMLKKIIEHQKEELRLFANSSEQAGFI
EELEKMVKEFKQYTVDAPSLEEMKKKLQAEDEKVLADKLHDLHLIYGELEKQLMTKYVDG
EDYLKLLSEKVASSAYLAQAKIYVDGFHHYTPQELTVLVELMKVCREVKIAVTSDYSYQD
FIPNDLHLFRLTSETYQELMGLAAENGIDIQEPILFNEQKRHQNSPELAYLERYYDERPT
PEFQSEPENIQLLPAVSRRAEVEGIAREVLSLVRDRGYRYRDIALIVRNAEDYHDLLQTI
FQDYEIPYFIDQKRAMFHHPLVEFVRSVLEVVSGSWRYETIFRVVKTDLLFPLSSDVHRL
REEMDELENYVLAYGIQGSKWTSKEPFTYRKYRSLEDMNLGKTDEELAFEQKINELKNMI
VPPIYSLQQKLKQGKIGKEKAEELYRFLTNLDIPQKIEALRNRCEEEGKLQEAREHEQVW
KAILHLFDQFVEMMGEEKVSISLFADLFETGLDSMQFALVPPALDQVVVASFERSRLSDI
KASFVLGVNDGVIPAKPKSDGLLSEKEREQLLESGLLLAPTGRQKLFDEQFLIYLALSSS
SEKLYVSYPLANEEGKTLLPSLVINRVKELFPLLQEKLLMTEPTDLEEEKQVDYITNPLT
SIAHLASQLQGWKRHYPMSSAWWDVYNFYVENPDWNSYSRKVLSSLFYKNEAKRLTKKTS
QRLYGKHIQASVSRMEKFEACPYAHFASHGLKLKERKVFKLAAPDIGELFHAALKMISDE
LRGGQKEWKNLTRKDCQQLSTAAVNELAPRLQNEILLSSNRHHYLTHKLQQIIERASLVL
SEHAKMSGFVPVGLELGFGPSAELPSMQFTLPNGHTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDKALNLVEVYYGLSLQILAYLDIVVTYAEQLLHDNRGALPAGVLYFHVHNPMINS
TKALQPDQIEAEIFKKFKMKGLLVGDEEAVRLMDETLESGHSQVISAGIKKTGGFYSNSS
VASEEDFTHLRQYVRGKFVEAGTEITNGKIDISPYKLKDKTPCAFCEYRSICQFDESMEN
NEYRQLSTESQSVILDKIREEAKRDE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtggggctacagtttttattaggacgttcaggaagcgggaaaacggaatatcttttaaat
agcatgcgccaagagctgttaaatgctccgcttgggcatccacttatttatattgtacct
gaacagatgacatttcagtcggagtatgcgcttgttcaaacacctgggttagaaggcatg
atgcgtgctcaagtttatagttttacacgtcttgcatggcgtatcctgcaagaagtggga
ggtattagccgctatcatgtggatcaaacaggtattcatatgatgcttaaaaaaattatc
gaacatcaaaaagaagagcttcgactgtttgcgaattcttcagaacaagcagggtttatt
gaagaactagaaaaaatggttaaagaatttaaacagtacacagtagatgccccgtctctc
gaagagatgaagaaaaagcttcaagcagaagatgagaaagttcttgctgataaattacat
gatttacatctcatttacggagaattagaaaaacagctgatgacgaaatatgtagatggg
gaagattatttgaagctgctgagtgaaaaagtagcgtcttctgcctaccttgctcaagca
aagatttatgtggatggatttcatcactatactcctcaagaattaaccgtattagtagag
ctgatgaaagtttgtagagaagtaaaaatagcggtgacttctgattattcatatcaagat
tttattccaaatgacttgcacttgtttcgattaacgagcgaaacgtaccaagaactaatg
ggccttgcggctgaaaacgggatagacattcaagagccaatcttatttaacgaacaaaaa
agacatcaaaacagtccagagcttgcctatttagaacgatattatgatgaacggccaacg
ccggaatttcagtcagagcccgagaacattcagcttctgccagctgttagccgaagagca
gaagttgaagggattgcaagagaagtgctttcacttgtgcgcgatcgcggctatcgctat
cgtgatattgccttgattgttagaaatgcagaagactaccatgacttgcttcaaaccatt
tttcaagattatgaaattccgtactttattgaccaaaagcgagcgatgtttcaccatcca
ctcgttgaatttgttcgctcagtcttagaagtggtaagcgggtcatggcgatatgaaacc
atctttcgagtagtgaaaacagatcttttatttcctttgtcatctgatgtgcaccggctt
cgcgaagagatggatgaattagaaaactatgtacttgcttacggtattcaaggatctaag
tggacgagcaaggaaccatttacctacagaaaatatcgttcacttgaagacatgaacctt
gggaaaacggacgaagagcttgcttttgagcaaaaaataaatgaattaaaaaatatgatt
gttcctcctatttattcgcttcagcaaaaattaaaacaagggaaaataggaaaagaaaaa
gcagaagagctctatcgttttttaacgaatttagatattccacaaaagatagaagcgctg
cgcaatcgatgtgaagaagaaggaaagcttcaggaagccagagagcacgagcaggtatgg
aaagcaattcttcacttatttgatcagtttgttgaaatgatgggagaagagaaagtatcg
atttctttgttcgcagatctatttgagacagggcttgacagcatgcagtttgcacttgtt
ccgcctgcactggatcaagtggttgtggcaagttttgagcgttcgcgtttatccgatatc
aaagcaagctttgtgttaggtgtaaatgacggtgtgattccagctaaaccaaaaagcgat
ggcctgttatctgagaaggagagagagcagctgcttgaatcaggtttattacttgcgcca
accggaagacaaaagctgtttgacgaacaatttctcatttatttagcactttccagctct
tcggaaaaactttatgtttcgtatcctcttgccaatgaggaagggaagaccctgctgcct
tcactcgttattaatcgagtaaaagagctatttccgctcctgcaggaaaagctgttaatg
acggaacctacagatttagaagaagaaaagcaagttgattatatcacaaatcctttaacg
agcatcgcgcatttagccagccagctgcaaggatggaaacgccattatccgatgagttcc
gcttggtgggatgtgtataatttttatgtggaaaatccagattggaactcatacagtcgg
aaagtactaagcagcttattttataaaaatgaagcaaaacggttaacaaagaaaacgagt
caacgtctgtatggaaagcatattcaagcaagcgtatcgagaatggaaaaatttgaagcc
tgtccatatgcgcattttgcttctcacgggctcaagcttaaagaacgaaaagttttcaaa
ttggcggctcctgacataggcgagttatttcacgcggcgttgaaaatgatttcagacgaa
cttcgcggcggtcaaaaagaatggaagaacttaacgagaaaagactgtcagcagctttct
acggctgcagtgaatgaacttgctccgcgcttgcaaaatgagattttattgagctcgaat
cgccaccactatttaacacataagctgcagcaaattattgaacgtgcgtcgcttgtgtta
agtgagcacgctaagatgagcggctttgttcctgttggattggagcttggatttggacct
agtgcagagctgccttctatgcagttcacactgccaaatggccatacgatggaactcgtt
ggccgaattgacagggtagataaagcggaaagctcaaaaggacttttactgcgtattgtc
gactataaatcaagcgataaagcattaaacttagtggaagtgtactacggtttatctctt
caaattttagcttatttagacatagtcgtgacgtatgctgaacagcttcttcatgataat
agaggagcattgcctgctggcgttctttatttccacgttcataatccaatgatcaacagt
actaaagcattacagccggatcaaattgaagctgaaatcttcaagaagtttaaaatgaag
gggctgcttgtaggagacgaggaagcagtaaggttaatggacgaaacgttagaatcaggg
cactcacaggttatatcagctggcattaaaaagacagggggcttttattccaattcttcg
gttgcgagcgaagaagattttacacatctccgtcagtatgtgcgaggtaaatttgtggag
gcaggtacggagattacaaatgggaaaattgatatttcgccttataaactaaaagataaa
acaccatgtgcgttttgtgaataccgctcaatttgtcagttcgatgaatcaatggaaaac
aacgaatatcgtcagcttagtacagagagtcaaagtgttattttagataaaattcgagag
gaggccaaacgagatgagtga
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