Priestia megaterium DSM 319: BMD_0643
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Entry
BMD_0643 CDS
T01219
Symbol
addA
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bmd
Priestia megaterium DSM 319
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_0643 (addA)
Enzymes [BR:
bmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMD_0643 (addA)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BMD_0643 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_22
PrmC_N
Motif
Other DBs
NCBI-ProteinID:
ADF37507
UniProt:
D5DAC8
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All DBs
Position
601960..605697
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AA seq
1245 aa
AA seq
DB search
MSEDIHVKPADSQWTDDQWNAIVSSGQDILVAAAAGSGKTAVLVERIIKKITMGDEPIDV
DRLLVATFTNASAAEMRNRIGEALEKELKKNPSSLHLRRQLNLLNRASISTLHSFCLEVI
RTYYYLIDVDPGFRIADDTEADLLREEVLEELFEEEYSIEQNERFFDLIDRYTSDRNDLD
IQLMVRKLYDFARSNPDPNGWLEMIVSQYDVTEDSSIDSLPFLSFLLQEVTTQLMGIESI
LKQGLELTKLPGGPAPRAVNAEEDLAQIHRLISASKHSFADLHEEMQNLNFTRLKPCKGE
AYDSQLLDDFGELRKKAKTSLEKLHADLFSRPLHGYMADFEKMKPVIETLIFLVQRFGER
YENMKKEKGLVDFSDLEHYCLQILSVKEDGVLKPSSIAQKYRTQFEEVLVDEYQDTNMVQ
ETLIKLVTRDSEEQGNLFMVGDVKQSIYRFRLAEPFLFLTKYKRFTQDGRQFGKRIDLNK
NFRSRSQVLDATNFIFNQLMDEEVGEIAYDDDASLKLGASYPKVEGMETELLLIAKENAE
EGGEEESDSSLVAFSEAELETAQLEARAMARKIKELVQNRFQIYDRKLDIMRNVTYRDFV
ILLRSMPWAAQIMDEFKQEGVPIYADLSTGYFDATEVMIMMSLLKVVDNPHQDIPLASVL
RSPVVGLSDEELATLRAEQKKGTYYDALKTYLAVSDDEELRDKVKYFYEQLKAWRTQARQ
SSLSELVWQIYRDTGFFEFVGGLPGGKQRQANLRALYDRARQYEATSFRGLFRFLRFIER
MQDRGNDLGAARALGEQEDVVRLMTIHSSKGLEFPVVFVAGLARQFNLMDLNKAYLLDKE
LGFGSKYIDPKLRITYPTLLQQTMKKKMKKESMAEEMRVLYVALTRAKEKLILVGTVKDA
PEKLRQWSSVMAHEDWTLPAHVRRDAKCYLDWIGSSLIRHQNVSHMVEGEVQPAEMIHQH
ASSWKLSTLLAGDLAEQPLEEQQHHEELLNALQKHEPVSESSDYKDEVYRRLNWSYDYRV
ASVHRSKQSVSELKRQQQLTDAGGSDDLVRESKAPLENRPLFLQEKSLTGAERGTATHAV
MQQLPLNKAYTLEMVQDFIQSMVTKELLTQEQADAVDANDVADFLDSDIAQGIRTARTVY
REMPFSLGVSAKEIYDHWEQEDETILVQGIIDCLYETEEGLVLLDFKTDNISDRFQGDFE
RAKPFLIDRYRIQLELYAKAIERIVKQPVQHRYLYFLDGGHAVEI
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagatatacacgtaaaaccggccgactcccagtggacggatgatcagtggaac
gccattgtttcatccggtcaagatatattagtagccgcggcggctggctcaggaaaaaca
gcggttttagttgaacgtattattaaaaagattacgatgggtgatgagccaatcgatgtt
gatagattactcgttgctacgttcacaaatgcttctgcagccgaaatgagaaatcgaatt
ggagaagcattggaaaaagagttaaaaaagaatccatcttctttgcacttgcgcagacag
cttaatttattaaaccgtgcgtcgatttctacgctccattctttttgtttagaagtcatt
cgaacgtattattatttgatcgatgtagaccctggttttcggattgcagatgatacggaa
gcggatcttctgcgtgaagaagtattagaagaattgtttgaagaagagtacagtattgaa
cagaacgagcgattctttgatttaattgatcgttatacaagtgacagaaatgacttagat
attcagcttatggtaagaaagctgtatgactttgcaagatctaaccctgacccaaacggc
tggcttgaaatgatcgtgagtcaatatgatgtgacagaagactcttctattgattcactt
ccgtttctatcttttcttttacaagaagtaacaacgcagctgatgggcattgagtcgatt
ttaaaacagggcttagagttaacaaagctgccaggagggcctgctcctcgcgccgttaat
gcagaggaagacctggctcaaattcaccggctgatcagcgcttctaagcattcttttgct
gatttgcatgaggaaatgcagaatttgaattttactcgtttaaagccatgtaaaggagaa
gcatacgactcgcagcttttagatgatttcggagagcttcgcaaaaaagctaaaacaagt
cttgaaaaacttcatgctgatttgttttctaggcctttgcacggctacatggctgatttt
gagaaaatgaaacccgttattgaaacgctaatctttttagttcagcgcttcggtgaacga
tatgaaaatatgaaaaaagagaaagggttagtggacttttctgatttagaacattattgc
ctgcaaatcttgagtgtaaaagaagatggagtgcttaagccttcgtccattgcccaaaaa
tatcgtactcagtttgaagaggtgcttgttgacgaatatcaagatacaaatatggttcaa
gaaacactgattaaattagtgacgagagatagtgaagaacaagggaatttatttatggtt
ggagatgtaaaacaatccatttaccgctttcgtttagcggagccatttttgtttttaaca
aagtacaagcgctttacacaagatggtcgccagttcggaaaacgtatcgatttgaataaa
aacttccgtagtcgttctcaagtgcttgatgctacaaactttatttttaatcagctgatg
gatgaagaagtaggagaaattgcatatgacgatgatgcttctttaaaattaggagcatcg
tatccaaaagtggaaggaatggaaacggagcttctgctcattgcaaaagaaaatgcagaa
gaaggaggggaagaagaatcggattcttctctcgtcgctttttcagaagcagagcttgaa
acggctcagttagaggcaagagcaatggcgcgtaaaatcaaagaactcgttcaaaaccgc
tttcaaatatatgatcgcaagctcgatatcatgagaaatgtgacgtatcgtgactttgtt
attttgcttcgttccatgccttgggctgcgcagattatggatgaatttaagcaagaaggc
gtgcccatttatgccgatttatcaacaggttattttgatgctactgaagtgatgattatg
atgtctttattaaaagtagtagataacccgcatcaagacatcccgttagcttctgttctt
cgctcaccggtagtagggctttcagatgaagagttagctacactgagagcagagcaaaag
aaaggaacgtattacgatgcgttaaaaacgtacttagcggtttcagatgatgaagaactt
cgcgataaagtaaagtatttctatgagcagttaaaagcatggagaacacaagctagacaa
agctctttgtcagaactggtatggcaaatttaccgcgatacgggtttctttgaatttgtt
ggcggacttcctggcgggaaacagcgtcaagccaatttacgtgctctttacgatcgcgct
cgacagtacgaggcaacttcatttagaggtctgtttcgatttttacgctttattgaacgc
atgcaggaccgagggaacgatttaggagctgctcgagcactgggagaacaagaagatgtg
gtgcgtttgatgacgatccacagcagtaaaggtcttgagtttcctgttgtttttgtagct
ggtcttgctcgccagtttaacttaatggacttgaataaagcatatttactcgataaagaa
ctaggttttggatctaaatatattgatccaaaactgcgtattacgtaccctactcttctt
cagcagaccatgaagaaaaaaatgaaaaaagaaagcatggcagaggaaatgcgggtatta
tacgtagctttgacgcgtgcgaaagaaaaacttattttagttggaacagtaaaagatgca
ccagaaaagctcagacaatggagctccgttatggcacatgaagattggacgcttccagct
cacgtgagaagagatgcaaaatgttatttagactggattggatcttctttaattcgtcac
caaaatgttagtcatatggttgaaggagaggtccagccggctgagatgattcatcagcat
gcttcaagctggaaactttcaacgttattagcaggtgatttagccgaacagcctcttgaa
gagcagcagcatcatgaagagcttttaaacgctcttcaaaagcatgagccagtttcagaa
tcgagcgattataaagacgaagtgtatagacgcttaaattggtcttatgattatcgtgta
gcttccgttcatcgttcgaagcaatctgtttctgaactaaaaaggcagcagcagctgacg
gacgcaggtggaagcgacgatctcgttcgggaatctaaagcacctcttgaaaatcgtccg
ctgtttcttcaagagaaatctctcacaggagctgaaagaggaacagctacacatgccgtt
atgcagcagcttccattaaataaagcttatacccttgaaatggttcaagactttattcaa
tcaatggttaccaaagaattattgacgcaagaacaagcggatgctgttgatgcaaatgat
gtagcagactttttagacagtgacattgcacaaggtattcgaacggctcgaacggtttat
agagagatgccttttagtttaggtgtctccgctaaagaaatctatgatcattgggagcag
gaagacgaaacaattttagtgcaaggtattattgattgtttgtatgaaacggaagaaggc
ctcgttttacttgattttaaaaccgataacatttcggatcgttttcaaggggattttgaa
cgagcaaaaccatttctaattgacagataccgcattcagttagagctttacgcaaaagcc
attgagcggattgtaaaacaacctgtgcagcatcgctatctgtactttttagatggtgga
catgctgttgaaatataa
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