Priestia megaterium DSM 319: BMD_0645
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Entry
BMD_0645 CDS
T01219
Symbol
sbcC
Name
(GenBank) nuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bmd
Priestia megaterium DSM 319
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_0645 (sbcC)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BMD_0645 (sbcC)
Archaeal homologous recombinant proteins
BMD_0645 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
AAA_21
ABC_tran
ACDC
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ADF37509
UniProt:
D5DAD0
LinkDB
All DBs
Position
606932..610324
Genome browser
AA seq
1130 aa
AA seq
DB search
MKPINLTVSGLHSFREKQTVDFEALCSGGVFGIFGPTGSGKSSILDAITLALYGKVERAA
NNTQGILNHGENELKVSFTFELENASHKKRYTVERSFKRTDELRVKSASSRLIEIEDETY
VLADKTNDVNQQVQELLGLTIDDFTRAVVLPQGKFAEFLSLKGTERRQMLQRLFNLEQYG
DQLSKKIRYQVQQLKTDLDKITAEQTGLGEASTEKVTEAEQLVSDSIILLEKREKEASDL
QERYDQQASLWKAQQEKALIEEKLVHASKQEEEIRQKQDVVTKAQQAERLFPYLETFEQA
EKQQKLYEDKVEKLKAQIVQKSEEYKRSNNLYEQARLQKNEQQPKLVVQKEQLQQASDLQ
KQIKEGQQEIKEAEVSLQQKQQALQAKNDELMEADKRYQQGLTLQKELKEALTKVEIQPD
YRQAVQQAFYRYQVWNNDKKNLDEGQKTYKEKAEQLKHLHTQKQTHQERYLQTIEQSKGL
FADIQGLYHTVCEREKEFQQLFQQADRLMSDLKRRKEKEWSRRLAHQLAEQLTQGEPCPV
CGSENHPNPVLHQQEDDITTESADQFEDQVNQLREQRFSYSSLKMQLEQLAKPLVEKIPE
LAEFMNEAGEVPALGEMDTDAFGHYAKKIEVEIKSLEQDYLQVSEKQRAILGQIQKVQQS
LEKIELELAHYQKEQAELEGKVNQQKQVLQAGKEAFQQDYPSFVFEEMEKINERLTEREK
EEQTIKARIEKSSVFFENQQKKIERLKEEKYAGEKEFTELKAMLSHKQSLVHSQIERLRT
LTDQEDIEQALQKTLLLLAELETNEQQAYQHWQTVQKAYQTLQMDEKAASESLETAYMQY
KKAAGKWEEAIGNSLFSEGKEVQQALLSHDEMKLLDETVQAYWDNIKQMKSSIEKLNIQL
NHQSIEEQQFEETQQLLHDIKAAVKEAVQLKGAAEQTLKSVKERHERFLVLEQDREEKQA
LFEQYQKLQTVFKGNAFVEYIAEEQLMSVSRDASERLGILTRQRYAIEVDSQGGFIMRDD
ANGGVKRPVSTLSGGETFLTSLALALSLSAQIQLRGEYPLQFFFLDEGFGTLDGELLDTV
VTALEKLQSNNLSIGVISHVQELRARLPKRLIVEPSEPSGKGTSVRVETL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctattaacttgaccgtttcggggcttcacagttttagagaaaaacaaactgtc
gattttgaagcgctttgttcaggcggtgtgtttggaatatttggtcctacaggaagtggg
aaatcctccattttggatgccattacactagctttatacggaaaagtagagcgtgcagcc
aataatacacaaggaattttaaatcacggggaaaatgaactgaaagtatcgtttacgttc
gagctggaaaacgctagtcataaaaaacgctatactgttgaacgaagctttaaacggact
gatgagcttcgtgtaaaatcagcttcaagtcgattgattgaaatcgaagatgaaacgtac
gtattagcagataaaacaaatgatgtaaaccagcaggtacaggagcttcttggtttaaca
attgatgattttacaagagctgttgtattaccgcaaggaaaatttgcggagtttttatcg
ttaaaaggaacggagcgtcgtcaaatgcttcagcgtctttttaatctcgagcagtacgga
gatcagcttagtaagaaaatacgctatcaagttcagcagctaaagacagacctagataaa
atcacggcagaacaaacgggattaggtgaagcttcaacagagaaagtaacggaagcggag
cagcttgtaagtgatagcattatacttttggaaaaacgagaaaaagaagcgtctgatttg
caggaaagatacgatcagcaggcgtctctttggaaagcgcagcaggaaaaagcactgata
gaagaaaaactagtgcatgcttctaagcaggaagaggagattagacaaaagcaagatgtg
gtgacgaaagctcagcaggcagaacgtctttttccctatttagaaacatttgaacaagct
gaaaagcagcagaagctttacgaagataaagtagaaaaattaaaagcacaaattgttcaa
aaaagtgaggaatataagcgatcaaataatttatatgagcaggctcgcttacaaaaaaat
gaacagcagcccaaattagttgttcaaaaagaacagcttcaacaagcttctgatcttcaa
aaacaaattaaagaaggacagcaagaaataaaagaagcggaagtttctcttcagcaaaag
cagcaggcacttcaagcgaaaaatgatgaattaatggaagcagataagcggtatcagcaa
ggcttgactcttcaaaaagagttaaaagaagcattaacaaaagtggaaattcaacctgat
tatcggcaggctgttcagcaagcattttatcgttatcaagtatggaataacgataaaaaa
aatctagatgaaggtcaaaaaacgtataaagaaaaagccgaacagcttaagcatttgcat
acacaaaaacaaacacaccaagagagatatctgcaaacaatagaacaaagtaaagggtta
tttgcagatattcaaggcttgtatcacaccgtatgtgagcgggaaaaagagtttcagcag
ctttttcaacaagcagatcgtttaatgagcgatctaaaaagacgcaaagaaaaagaatgg
tcacgccgtctggctcatcaattagctgagcagctgacccaaggtgagccttgtccagtt
tgtggctctgagaatcaccctaaccccgtattacaccaacaagaagatgacatcacaact
gaatcagcggatcagttcgaagatcaagttaatcaattgcgtgaacagcgatttagctat
tcgtcgctcaaaatgcagcttgaacagctagctaaacctcttgttgaaaaaatacctgag
ttagctgagtttatgaacgaagctggcgaagttcctgctttaggagaaatggatacagat
gcctttgggcattatgctaagaaaatagaagttgaaatcaaatctcttgagcaggattat
ttgcaggtaagtgaaaaacagcgagcaattctcgggcagatacaaaaggtccagcaaagt
cttgaaaagattgaattagagcttgctcattatcaaaaagaacaagctgaattagaagga
aaagtaaatcagcaaaaacaggtgctacaagcaggaaaagaagcttttcaacaagactat
ccttcctttgtatttgaagagatggaaaaaattaatgaaaggctgactgaaagagaaaaa
gaagagcagacaataaaggctcgaattgaaaaaagcagcgtattttttgaaaatcagcaa
aagaaaatcgaacgtctaaaagaagagaaatatgcgggcgaaaaagaatttacagaatta
aaagcaatgctgtctcataaacaatctcttgttcactcgcaaattgaacgcttgcgtacg
cttacagatcaagaagatattgaacaggcgctgcaaaaaacacttcttttacttgcggag
ttagagacgaatgaacagcaggcatatcaacattggcagactgttcaaaaagcgtatcaa
acgctgcaaatggatgaaaaagcagcgagcgaatctctagaaacagcttatatgcagtat
aaaaaagcagctggaaaatgggaagaagctatagggaattctttattcagcgaaggaaaa
gaagttcagcaagctttgttatcacatgatgagatgaaattgttggatgaaactgttcag
gcttattgggacaacataaaacagatgaagtcatcaattgaaaagttaaatatccagctg
aatcaccaatccatagaagagcagcaatttgaagaaactcagcagctgcttcatgatata
aaagcggctgtgaaagaagccgttcagctcaagggagcagctgagcaaacgttaaaaagc
gttaaagaacgacatgagcgatttttagtgcttgaacaagaccgtgaagaaaaacaagcg
ttatttgaacagtatcaaaagcttcaaacagtatttaaaggaaatgctttcgtggaatat
attgctgaagaacagctgatgtccgttagccgagatgcttcagagcgtctgggtatatta
acacgtcagcgctatgccattgaagttgattcccaaggcggctttattatgagagatgat
gccaatggaggcgtaaaacgtccggtttcaactttatctggtggagagacgtttttaact
tcgctggctttagccctttcattatctgcacaaattcagctaagaggagaatatccactg
cagtttttctttttagatgaaggatttggaacacttgatggagagcttcttgatacggtt
gttacagcgcttgaaaagcttcaatcaaataatttatcaattggagtcatcagtcacgtt
caagaacttcgcgctcgtctgccaaaacgtttgattgttgagccatccgagccttctggc
aaaggaactagtgtaagagtagaaactttatag
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