Priestia megaterium DSM 319: BMD_2212
Help
Entry
BMD_2212 CDS
T01219
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMD_2212 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmd03019
]
BMD_2212 (recQ)
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_2212 (recQ)
Enzymes [BR:
bmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMD_2212 (recQ)
Messenger RNA biogenesis [BR:
bmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMD_2212 (recQ)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BMD_2212 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ADF39060
UniProt:
D5DEA2
LinkDB
All DBs
Position
2204652..2206787
Genome browser
AA seq
711 aa
AA seq
DB search
MQFEQTLTHLQSYFGYDSFRKGQEESIRYVLEGHNTACIMPTGGGKSLCYQIPSLLLEGT
TLVISPLISLMKDQVDTLNAAGIPATYINSSLTHTEVQQRLEEVALGEYKLLYVAPERLE
SPQFLEQLQMLPIPLVAVDEAHCISQWGHDFRPSYLRINELISKLSNAPIVMGLTATATP
QVREDICRALRINEEYTVMTGFERENLSFAVVKGQDRISYIEQYIRKNDQEAGIIYAATR
KDVEELHARLQKSGVNVSKYHAGMSANSRDEEQNRFLQDDVQVMIATSAFGMGIDKSNIR
FVLHYQLPKNMESYYQEAGRAGRDGLPSECIVLYSPQDIRVQRFLIEQSTSNPKKQIQDL
EKLQNMVNYCHTEGCLQAYILHYFGESEAHECGRCSNCTDDRVEIDVTVDTQKVLSCMIR
MGERFGKMMIAQVLTGSRNKKVVDFGFDKLKTYGVMSDRSAKEVSDFIEYLISEQFILVG
QGSFPTLSVAAKGKGVLLGTEKVMRKEQMEVKQIVQDDELFAHLRSVRKQLADEAGVPPF
VIFSDDTLHDMCAKLPVKLEQFATVKGVGEQKQERYGERFTTEIKQFCEENPERKREVSA
PAPKKARASSKEGSHLMTYELFQQGKSLDEIAAERELSRITIENHLFKCAEEEKEIDWSP
FLSEEDEQLILEAASSVGDEKLKPIKEELPENITYFMIKVALFKQKMKQLS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatttgaacaaactttaacacatttacagtcctattttggctatgattcatttcga
aaaggacaggaagagtcgattcgttatgttttagaagggcacaatactgcttgtattatg
ccaacaggaggagggaaatcgctttgttatcaaattccttcgttgcttttagagggaaca
acactggttatttctccgttgatttccttgatgaaagaccaagtcgacacgctgaacgca
gctggtattccggctacgtatattaacagctcgctgacacatacggaagtacagcagcgc
ttagaagaagtggcgctcggtgaatataagttgctttatgtagcgccggaacgactggag
tctccgcagtttttagagcagcttcaaatgcttcctatcccgcttgtagcggtagatgaa
gcgcactgtatttcacagtggggccatgatttcagaccgagttatttgcgcatcaatgaa
ctgatcagcaagctgtctaacgctccgattgtgatggggctgacggctacggcgacgcct
caagtacgtgaagatatttgccgagctcttcgtattaacgaagagtacacggtgatgact
gggtttgaacgtgaaaatttatcgttcgctgtggtaaaaggccaggatcgaatcagctat
atcgagcagtatatccgtaaaaatgaccaagaagcaggaatcatctatgccgctacgcgt
aaagatgttgaagagcttcatgctagattgcaaaagtcaggagttaacgtatcaaaatac
catgctggtatgagcgcaaacagccgtgatgaagagcagaaccgttttctgcaagatgat
gttcaggtaatgatagccacgtctgccttcgggatggggatcgataaatcaaatattcgc
tttgttcttcactatcagcttcccaaaaatatggaaagctattatcaagaagcaggacgt
gctggtcgtgacggactgccaagtgaatgtatcgtgctttattctcctcaagatattcgc
gtgcagcgctttttgattgaacagtcaacgtcgaatcctaaaaagcaaattcaagatctt
gaaaagctgcaaaatatggttaactactgtcatacagaaggctgcttgcaagcgtatatt
cttcattattttggagaaagtgaagcgcatgagtgcggccgctgcagcaactgtacggat
gatcgcgtggaaatagacgtaacggtcgatacgcaaaaagtattatcttgtatgattcgt
atgggcgaacgtttcggtaaaatgatgattgctcaagtgttaacgggctctcgaaataaa
aaagtagtggattttggttttgataagctgaaaacgtacggcgtcatgagcgaccggtcg
gctaaagaagtaagcgattttattgagtatttgatttcagagcagtttattttagtagga
caaggatcatttcctaccttatcagtagcggccaaaggaaaaggtgtgcttcttggcacg
gaaaaagtaatgagaaaagaacaaatggaagtgaagcaaattgtccaagacgacgagctg
tttgctcatttgcgttccgttcgaaagcagctggcagacgaagccggcgtgcctcctttt
gttattttctcagacgatactcttcatgatatgtgtgcgaaacttccggtaaagcttgaa
cagttcgctactgtaaaaggagtcggagaacaaaaacaagagcggtacggagaacgattc
acgactgaaatcaaacagttttgtgaagaaaatccggagcgaaagcgagaagtatcagcg
cctgctccgaaaaaagcaagagcttcatcaaaagaaggctctcacttaatgacgtatgag
ctgtttcagcaaggaaaatcgttagatgaaattgctgctgaacgtgaactgagccgcatt
accattgaaaatcatttgtttaaatgcgcagaagaagaaaaagaaattgactggtcacct
tttctttcagaggaggacgaacagcttattttagaagctgcttcctcagtaggcgatgaa
aagttaaaaccaatcaaagaagaattacctgaaaacatcacttattttatgattaaagta
gcgttattcaaacaaaaaatgaagcagctatcttaa
DBGET
integrated database retrieval system
