KEGG   Priestia megaterium DSM 319: BMD_4105
Entry
BMD_4105          CDS       T01219                                 
Name
(GenBank) conserved hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bmd  Priestia megaterium DSM 319
Pathway
bmd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BMD_4105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmd03019]
    BMD_4105
Messenger RNA biogenesis [BR:bmd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BMD_4105
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2
Other DBs
NCBI-ProteinID: ADF40935
UniProt: D5DKT9
LinkDB
Position
complement(3960047..3961609)
AA seq 520 aa
MMDTNTIIFALLGLIVGAVVGFFVCKSIAEAKIAGAKSSAEQIIDEGTREAEALKKEALL
EAKDEIHQLRTEAEQDIRDRRAELQKQENRLMQKEENLDRKDESLDKREALLEKKDDSLT
VKQQHIEEMESKVEEVVRAQQTELERISSLTREDARAIILDRVENELSHDIAIMVKETEN
RAKEDADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
EVGEQTTFEVGVHGLHPDLMKILGRLKFRTSYGQNVLKHSMEVAHLSGLMAAELGEDETL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINAIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDTIG
DLEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgatggatactaatacaatcatcttcgctttgcttggcctaatcgtcggtgcagttgtt
ggcttttttgtttgtaaatcgattgctgaagctaaaattgcgggagcaaagtctagtgca
gaacaaattattgatgaaggaacccgcgaggcggaagctttgaaaaaagaagctttacta
gaagcgaaggatgaaatccatcagcttcgtacagaggcagaacaagatattcgtgatcgt
cgagcagaacttcaaaaacaagaaaatcgattaatgcaaaaagaggaaaatcttgatcgt
aaagacgaatcacttgataaacgtgaagcgttacttgaaaagaaagatgattctcttact
gttaaacaacagcatattgaagagatggaaagcaaagttgaagaagtagtacgtgcacag
caaacagagctagagcgcatttcaagcttaacaagagaagatgcaagagcgattatttta
gatcgtgttgaaaatgaactttcccacgacattgcaataatggtaaaagaaacagaaaac
cgtgcaaaagaagacgccgataaaaaggcgaaagaaattctttcacttgctattcagcgt
tgcgcagcagatcatgttgctgaaacgactgtctcagttgttaacttgccaaatgacgaa
atgaaaggccgaattatcggtcgagaaggtcgaaacatccgtacgcttgaaactttgaca
ggaattgatcttattattgatgatacgccagaagcagttattttatcaggatttgaccca
attcgtcgtgagacagcaagaattgcacttgataaactcgttcaagatggtcgtatccat
cccgcgcgtattgaagaaatggttgaaaaatctcgccgtgaagtggacgaatatattcgt
gaagttggtgaacaaacgacgtttgaagtcggtgttcacgggttgcacccagacttgatg
aaaattcttggtcgcttaaaattcagaacaagctatggtcaaaatgtgctgaaacattca
atggaagtagcgcatttatcaggacttatggctgctgaattaggtgaagatgaaacgtta
gccaaacgagcaggattgttacatgatattggtaaagcaattgatcatgaggtagaagga
agtcacgtagaaatcggtgttgaattagctacaaagtataaagaacatccggttgttatt
aacgcgattgcttctcaccatggagatacagaaccaacatcaatcattgctgtactagtt
gcagcagcggatgcattatctgctgcaagaccaggtgctcgtagtgagacattagaaaac
tacattcgtcgtcttgaaaagttagaagaaatttcagagtcttatgaaggcgttgaaaaa
tcatttgcgattcaagcagggcgtgaagttcgtattatggtgaaaccagatacgattggt
gatctagaagcgcatcgacttgctcgagatatccgaaaacgaattgaagatgagctggat
tatcctggccacatcaaagtaaccgttattcgtgaaacaagagcagtagagtatgcaaaa
taa

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