Priestia megaterium DSM 319: BMD_4105
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Entry
BMD_4105 CDS
T01219
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMD_4105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmd03019
]
BMD_4105
Messenger RNA biogenesis [BR:
bmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMD_4105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADF40935
UniProt:
D5DKT9
LinkDB
All DBs
Position
complement(3960047..3961609)
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AA seq
520 aa
AA seq
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MMDTNTIIFALLGLIVGAVVGFFVCKSIAEAKIAGAKSSAEQIIDEGTREAEALKKEALL
EAKDEIHQLRTEAEQDIRDRRAELQKQENRLMQKEENLDRKDESLDKREALLEKKDDSLT
VKQQHIEEMESKVEEVVRAQQTELERISSLTREDARAIILDRVENELSHDIAIMVKETEN
RAKEDADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
EVGEQTTFEVGVHGLHPDLMKILGRLKFRTSYGQNVLKHSMEVAHLSGLMAAELGEDETL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINAIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDTIG
DLEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatggatactaatacaatcatcttcgctttgcttggcctaatcgtcggtgcagttgtt
ggcttttttgtttgtaaatcgattgctgaagctaaaattgcgggagcaaagtctagtgca
gaacaaattattgatgaaggaacccgcgaggcggaagctttgaaaaaagaagctttacta
gaagcgaaggatgaaatccatcagcttcgtacagaggcagaacaagatattcgtgatcgt
cgagcagaacttcaaaaacaagaaaatcgattaatgcaaaaagaggaaaatcttgatcgt
aaagacgaatcacttgataaacgtgaagcgttacttgaaaagaaagatgattctcttact
gttaaacaacagcatattgaagagatggaaagcaaagttgaagaagtagtacgtgcacag
caaacagagctagagcgcatttcaagcttaacaagagaagatgcaagagcgattatttta
gatcgtgttgaaaatgaactttcccacgacattgcaataatggtaaaagaaacagaaaac
cgtgcaaaagaagacgccgataaaaaggcgaaagaaattctttcacttgctattcagcgt
tgcgcagcagatcatgttgctgaaacgactgtctcagttgttaacttgccaaatgacgaa
atgaaaggccgaattatcggtcgagaaggtcgaaacatccgtacgcttgaaactttgaca
ggaattgatcttattattgatgatacgccagaagcagttattttatcaggatttgaccca
attcgtcgtgagacagcaagaattgcacttgataaactcgttcaagatggtcgtatccat
cccgcgcgtattgaagaaatggttgaaaaatctcgccgtgaagtggacgaatatattcgt
gaagttggtgaacaaacgacgtttgaagtcggtgttcacgggttgcacccagacttgatg
aaaattcttggtcgcttaaaattcagaacaagctatggtcaaaatgtgctgaaacattca
atggaagtagcgcatttatcaggacttatggctgctgaattaggtgaagatgaaacgtta
gccaaacgagcaggattgttacatgatattggtaaagcaattgatcatgaggtagaagga
agtcacgtagaaatcggtgttgaattagctacaaagtataaagaacatccggttgttatt
aacgcgattgcttctcaccatggagatacagaaccaacatcaatcattgctgtactagtt
gcagcagcggatgcattatctgctgcaagaccaggtgctcgtagtgagacattagaaaac
tacattcgtcgtcttgaaaagttagaagaaatttcagagtcttatgaaggcgttgaaaaa
tcatttgcgattcaagcagggcgtgaagttcgtattatggtgaaaccagatacgattggt
gatctagaagcgcatcgacttgctcgagatatccgaaaacgaattgaagatgagctggat
tatcctggccacatcaaagtaaccgttattcgtgaaacaagagcagtagagtatgcaaaa
taa
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