Priestia megaterium DSM 319: BMD_4132
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Entry
BMD_4132 CDS
T01219
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMD_4132 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmd03019
]
BMD_4132 (pnp)
03016 Transfer RNA biogenesis [BR:
bmd03016
]
BMD_4132 (pnp)
Enzymes [BR:
bmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BMD_4132 (pnp)
Messenger RNA biogenesis [BR:
bmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BMD_4132 (pnp)
Transfer RNA biogenesis [BR:
bmd03016
]
Prokaryotic type
tRNA degradation factors
BMD_4132 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
ADF40962
UniProt:
D5DKW6
LinkDB
All DBs
Position
complement(3990351..3992477)
Genome browser
AA seq
708 aa
AA seq
DB search
MEQEKRVFSVDLAGRKLEVEVGQLAKQANGAALIRYGDTVVLSTATASKEPKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSVVMSV
DQNCSSEIAAMFGSSLALSVSDIPFEGPIAGVIVGRVDNEFVVNPTVDELEKSDIHLTVA
GTKDAINMVEAGADEVPEEVMLEAIMFGHEQIKKLIAFQEEIVAAVGKEKVEVALYTVDA
DLERQVREIAEGDMNRAVQVQEKHARENAIKEVKSAVAAKFEEQDVEEEVLNQVNEILSK
LVKSEVRRLITEEKVRPDGRSIDEIRPLSSETNLLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLSVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPNEK
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLIKSGEHYSILT
DIQGMEDHLGDMDFKVAGTENGVTALQMDIKIDGLSREILDEALQQAKKGRMQILNHMMS
TIATPRQELSQYAPKILTMAINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIFISS
IDQPMNEKAKKIIEDLVREVEVGQMYLGKVKRIEKFGAFVEIFSGKDGLVHISELAEERI
GKVEDVVSIGDEILVKVMEIDKQGRVNLSRKAILKEQKEKEEKAKETK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaaaaacgagtgttctccgtagatctagctggacgaaagctagaagttgaa
gttggccagttggcaaaacaagcaaatggcgcagcattaatccgctatggagacacagtt
gtattaagtacagcaacggcttcaaaagagcctaaaaatgtagatttcttcccgttaaca
gtaaactatgaagagcgtttatatgcagtcggtaaaatcccaggtggattcattaagcgt
gaaggcagaccaagtgaaaaagcaatcttggctagccgtttaatcgaccgtccgattcgt
cctttattcgcagatggtttccgaaacgaagttcaagttgtcagcgttgtaatgagcgta
gatcaaaactgttcttcagaaatcgcggcaatgttcggttcttcattagcattatcagta
tctgatattccatttgaaggtcctattgcaggcgtaattgtaggccgtgtagacaatgaa
tttgttgtaaacccaacggtagatgagcttgaaaaaagcgatattcatctgacggttgct
ggtacaaaagatgcgatcaacatggttgaagcaggcgctgatgaagtaccggaagaagta
atgctggaagcaattatgtttggacacgagcaaattaaaaaattaattgcgttccaagaa
gaaattgtagcagcagtaggcaaagaaaaagtagaagttgcgctttatactgtggatgct
gaccttgagcgtcaagttcgcgaaattgcagaaggtgacatgaaccgtgccgttcaagtt
caagaaaagcatgcgcgcgaaaatgcgattaaagaagtgaaaagcgcagtagctgcaaaa
tttgaagagcaagatgtagaagaagaagtactaaatcaagtgaatgaaattttatcgaag
cttgttaaaagtgaagtgcgtcgcttgatcacagaagaaaaagtgcgtcctgatggccgt
agtattgacgaaattcgtccactttcttctgaaacaaacttgcttcctcgtacacacgga
tctggattatttacacgtggacaaactcaagcgcttagcatttgtacattaggtgcactt
ggcgatgtacaaattttagatggtttaagtgtagaagaatctaaacgcttcatgcatcac
tataactttccttcatttagtgttggtgaaactagaccgatgcgcggaccgggtcgtcgt
gaaattggacatggtgcgctaggtgaacgtgcacttgagcctgttattccaaatgaaaaa
gatttcccttatacaattcgtcttgtatctgaagtattagagtcaaacggttctacttca
caagcgagtatttgtgcaagtacgcttgcaatgatggatgctggggttccaattaaagca
cctgtagcagggattgccatgggtctgatcaaatcaggtgaacactactcgattctaacg
gacattcaaggaatggaagatcatctaggagatatggactttaaagtagcaggtacggaa
aatggcgtaactgcgcttcaaatggatattaaaattgacgggttatctcgtgaaatttta
gacgaagcccttcaacaagcaaaaaaaggccgtatgcagatcttaaatcatatgatgtca
acgattgctacgcctcgtcaagagctttctcaatatgctcctaagatccttacaatggct
attaaccctgataaaattcgtgatgttattggaccaagcggtaagcaaatcaataaaatc
atcgaagaaacaggcgttaaaattgatatcgaacaagatggtacaatcttcatttcttct
attgatcagccaatgaatgaaaaagcgaagaaaattattgaagatcttgtacgcgaagtt
gaagtcggccaaatgtacttaggaaaagtaaaacgaattgaaaaattcggtgcatttgta
gaaatcttcagcggaaaagatgggcttgttcacatttcagagcttgcagaagagcgtatt
ggaaaagtggaagacgttgtatcaattggcgacgagattctagttaaggttatggaaatt
gataaacaaggtcgcgttaacttatctcgtaaagcaattttaaaagaacaaaaagaaaaa
gaagaaaaagcaaaagaaacaaaataa
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