Priestia megaterium DSM 319: BMD_4547
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Entry
BMD_4547 CDS
T01219
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
bmd
Priestia megaterium DSM 319
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmd03016
]
BMD_4547 (rimO)
Enzymes [BR:
bmd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
BMD_4547 (rimO)
Transfer RNA biogenesis [BR:
bmd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BMD_4547 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
GspL_C
P-mevalo_kinase
PAXIP1_C
Motif
Other DBs
NCBI-ProteinID:
ADF41371
UniProt:
D5DMN9
LinkDB
All DBs
Position
complement(4386175..4387533)
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AA seq
452 aa
AA seq
DB search
MSTVAFHTLGCKVNHYETEAIWQLFKGQGYERVEYEQTADVYVINTCTVTNTGDKKSRQV
IRRAVRKNPDAVICVTGCYAQTSPAEIMAIPGVDIVVGTQDRVKMLDYIEQFKKERQPIN
GVGNIMKTRIYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVVAQ
AQQLVDAGYKEIVLTGIHTGGYGEDMKDYNLAQLLRDLESQVKGLKRIRISSIEASQITD
EVIEVLDQSEMVVRHLHIPLQSGSNTVLKRMRRKYTMEFFGERLNRLKEALPGLAITSDV
IVGFPGETEEEFMETYNFIKEHGFSELHVFPYSKRTGTPAARMTDQIDEEVKNQRVHRLI
ELSNQLAKEYASTFEGEVLEVIPEEKYKEDPESGLYVGYTDNYLKVVFKASEEMVGKLVK
VKISKAGYPYNEGEFVRVLDEVHLQDQVKMSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagttgcttttcacacgctagggtgtaaagtaaatcactatgaaacagaagca
atttggcaattgttcaaaggccaaggctatgagcgtgttgaatatgaacaaactgccgat
gtatatgtaattaatacatgtacggtaacaaatacaggagataaaaaaagccgtcaagtt
attcgcagagctgtgcggaaaaatccagatgcggttatttgtgtaactgggtgttatgct
caaacttcgccagctgaaattatggccattcctggtgttgatatcgtagtaggtacacaa
gatcgcgttaagatgcttgattatattgaacaatttaaaaaagagcgtcagccgattaac
ggcgtaggaaacattatgaaaacacgcatatatgaagagctagatgtaccggcttttaca
gaccgtacgcgtgcttcattaaagattcaagaaggctgtaacaacttctgtacattctgt
attattccatgggcgcgcggtttaatgcgatctcgtgatcctaaagaagtagtagcacaa
gcacagcagctagtggatgcgggctataaagaaatcgtgttaacaggtattcacactggc
ggatacggagaagacatgaaagattacaatcttgcccagcttcttcgtgatttagagtct
caagtaaaaggattaaaacgcattcgtatttcgtcaattgaagcaagtcaaattacggac
gaagtgattgaggtactagatcaatcagagatggttgtacgtcatttgcatattcctctt
caatcaggttcaaatacggtattgaagcgcatgcgtcgtaagtatacaatggagttcttt
ggtgagcgcttaaaccgtctgaaagaagctcttcctggattagcgattacatcagatgtt
attgttggcttcccaggtgaaacagaagaagagtttatggagacgtataactttattaaa
gagcacggtttttcagagcttcatgtattcccatattctaaacgtacaggtacgccagcg
gcccgtatgaccgaccaaattgatgaagaagtaaaaaatcaacgtgtgcatcgtttaatc
gaactttcaaatcaattggcaaaagaatatgcttcaacgtttgaaggagaagtactagaa
gtaattccggaagaaaaatataaagaagatcctgaaagtggtttatatgtaggatatact
gataactacttaaaggttgtgtttaaagcgtctgaagaaatggttggaaagcttgtaaaa
gtgaaaatttcaaaagctggatatccttataatgaaggtgagtttgttcgcgtgctagat
gaggttcatcttcaggatcaggtgaaaatgagctcataa
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