Priestia megaterium DSM 319: BMD_4559
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Entry
BMD_4559 CDS
T01219
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03030
DNA replication
bmd03430
Mismatch repair
bmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMD_4559 (holA)
03430 Mismatch repair
BMD_4559 (holA)
03440 Homologous recombination
BMD_4559 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmd03032
]
BMD_4559 (holA)
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_4559 (holA)
Enzymes [BR:
bmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMD_4559 (holA)
DNA replication proteins [BR:
bmd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMD_4559 (holA)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMD_4559 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Med30
KH_PARP14_8
Motif
Other DBs
NCBI-ProteinID:
ADF41383
UniProt:
D5DMQ1
LinkDB
All DBs
Position
complement(4399727..4400743)
Genome browser
AA seq
338 aa
AA seq
DB search
MAVDSLKSITKNNIAPVYLIHGVNAFMSKKIRDKIVDYTLNEEDKEFNLSLYDLEETSID
QVLEDAETLPFLGDKRVVVAKNAAFLTAEKSKDKVEHDLAKLQQYVEQPPSFSTLILLAP
YEKLDERKKITKLLKKQAAYIEANEFGEKEMKQWIHNLLSKDGVNMDEDAVTLLIQLVGL
NVTLVTNEIEKMVLYVGQDGVITKEVVLKLVAKTLEQNVFTLIDAVIQRKVSTALNMYQD
LLRNNEEPIKILSLLATQFRLIYHTKQLSSQGYGQQQIAQTIKVHPFRVKIALQQSRSFE
EQQLKEILKDLAEADYEMKTGKMDKALILQLFLLKRAQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttggcagttgatagcttaaaaagtattaccaaaaataatatagccccggtttatttaata
cacggggtcaatgcatttatgagtaaaaagattagagataaaatcgtcgactatacgtta
aatgaagaagataaagaatttaacttgtcactatacgatttagaagaaacatcgattgat
caagttctagaagatgctgaaacgcttccttttttaggagacaagcgtgtagtggttgcg
aaaaatgcagcatttttaacggctgaaaaatcgaaagataaagtcgagcatgatttggca
aaactgcagcaatatgtggagcagcccccgtctttttcaacgttaattctactagcccct
tatgaaaagctggatgaaagaaaaaaaataacaaaattattaaaaaaacaagcagcttac
attgaagcgaacgaatttggtgaaaaagaaatgaagcagtggattcataatttactttca
aaagatggagtgaatatggatgaagatgctgtgacgctgcttattcagcttgtgggtctt
aatgtaacgcttgtgacaaatgaaattgaaaaaatggtattatacgttggacaagacgga
gtcattacaaaagaagttgtgcttaagcttgtggcaaaaacgcttgaacaaaatgtattt
acgcttattgacgctgttattcagcgaaaggtttctactgctttaaatatgtatcaggat
ttactgcgtaataacgaagagcctattaaaattttatctttgttagcgacgcagtttcgg
ttgatttatcatacgaagcagctgtctagtcaagggtacggtcagcagcaaattgctcaa
acgattaaggttcatccgtttcgtgtgaaaattgctttgcagcagagcagaagttttgag
gaacagcagcttaaagaaattttaaaggatttagcagaggcagattatgaaatgaagacg
gggaaaatggataaagcgcttattttacagctgtttttattaaaaagagcgcaataa
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