Priestia megaterium DSM 319: BMD_4602
Help
Entry
BMD_4602 CDS
T01219
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BMD_4602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_4602
Enzymes [BR:
bmd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BMD_4602
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BMD_4602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_22
AAA_16
AAA
Rad17
AAA_18
AAA_12
AAA_28
NTPase_1
NPHP3_N
nSTAND3
T2SSE
TsaE
AAA_17
AAA_29
AAA_25
Crinivirus_P26
Motif
Other DBs
NCBI-ProteinID:
ADF41426
UniProt:
D5DLF0
LinkDB
All DBs
Position
complement(4434541..4436898)
Genome browser
AA seq
785 aa
AA seq
DB search
MNEEQVNPSQPERHYISGTSIVTVFHNEENLYNVTRIRIKKTNLEIEDKETVVTGYFPKL
NEDEVYTFYGDFKEHPKFGLQFHVEQFKKELPQSRQGVVQYLSSDLFHGIGKKTAENIVD
ALGERAIFRILQNESVLKEVPRLSADKAEALVTQLREHQGLEEVMVKLTDLGFGPQLSMK
IFQAYKQEALEIVQNNPYQLVEDIQGIGFSRADELGKRLGMATNHPDRLRAGILYVIEQE
CNQMGHVYVTADQLYGKTAELLRKSRHENLSEMDLTREVDALKADKKLIIQDEKIYFPPL
FYAEKGLVKAIQKIMAQTQYEEQFPESEFLLALGELEERLDVQYAPSQRKGIQTALMSPM
LLLTGGPGTGKTTVIKGIVELYAELHGCSLNPGDYKKDEAFPVLLVAPTGRAAKRMSEAT
GLPAVTIHRLLKWNGQEGFDHNEENPIDGKLLIVDEVSMVDLWLAHQLFKSLPANLQVIL
VGDEDQLPSVGPGQVLKDLLSSEVVPTVRLTDVYRQAEGSSIIDLAHEIKKGKLPEDLSR
QQGDRSFIRCQGQHITNVVQQVCGNALKKGYTAKDIQVLAPMYKGPAGIDKLNEVLQELF
NPASEQRRELKHGDITYRVGDKVLQLVNQPDSNVFNGDMGEIVSVFFAKENTEKQDMLVI
SYEGNEVTYTKQDFNQITHAYCCSIHKSQGSEFPIVVLPIVKSYYRMLRRNLLYTAVTRS
KQFLILCGEDEAFQLGVSRNEDSVRQTNLQPLLRESLDNDIEDPEIPFMKDANIGMENVT
PYDFM
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaacaagtgaacccttcacagccagaacgtcattatataagcggcacgtcg
attgtaaccgtctttcataacgaagaaaacttatataacgttacgcggatacggatcaaa
aaaacaaatttagagattgaagataaagaaacggtcgtcacaggttattttcctaagctg
aatgaagatgaagtatacacgttttacggagacttcaaagagcatccaaagtttggtctg
cagtttcatgttgaacagtttaaaaaagaacttccgcaatcaaggcaaggggttgttcag
tacctatctagcgatttatttcacggaatcggtaaaaaaaccgctgaaaacattgtggac
gctctaggagaacgcgctatttttcgtattttgcaaaatgagtctgtgctaaaagaggtt
ccgaggctttcagccgacaaggcagaagctttagtcacgcagcttcgtgaacatcaaggg
ttagaagaagtaatggtaaagctgacagaccttgggtttggaccgcagctttcgatgaag
attttccaagcgtacaaacaagaagcgcttgaaattgttcaaaataatccttatcagctc
gtagaagatattcaaggtattggctttagcagagccgatgaacttggaaagaggcttggt
atggcaaccaatcatcctgatcgtttgcgtgcaggtattttatatgtcattgagcaagaa
tgcaatcaaatggggcatgtatacgtcacggcagatcagctgtatggaaaaacagcagag
cttcttcggaaaagcaggcatgagaatctgtctgaaatggatcttacaagagaagtggac
gcattaaaagcagataaaaagcttatcattcaagacgaaaaaatttattttcctcccctt
ttctatgctgaaaaagggctggttaaagctattcaaaaaattatggctcaaacgcagtac
gaagagcagtttccggaatcagaattcttattggctctgggtgaactagaagagcggtta
gacgtgcaatatgcaccgtctcagcgcaagggtatacaaaccgctttaatgtctccaatg
cttcttttaacaggtggaccaggtacagggaaaacaacggttattaaaggaatagtcgaa
ctttatgcagaacttcacggatgttcgttaaatccaggggactataaaaaagatgaagct
tttcctgttttacttgtggcacccacgggacgagctgctaaacgaatgagcgaagcgacg
ggacttccggcagttacgattcaccgattattaaaatggaacggacaagaaggatttgat
cataatgaggagaatccaattgacggaaagttattgattgtggatgaagtatcaatggta
gatttgtggcttgctcatcagctgtttaaatctcttcctgctaatttacaggttatttta
gttggagacgaagatcagcttccgtcagtaggtccgggccaggtgttaaaagatttgctg
agttcagaagtagttcctaccgtccgtctgacagatgtatacaggcaagcggaagggtcg
tcaattattgatttggctcatgaaataaaaaaaggaaagcttccggaagacttatcaagg
cagcaaggagatcgttcctttattcgttgtcaaggacagcacattacgaacgtcgtgcaa
caagtttgcgggaatgcgttaaaaaaaggctatacggctaaagatattcaagttttagct
cctatgtataaaggtcctgcaggtattgataagctgaatgaagttcttcaggaattattc
aacccggcttctgagcaacgaagagagcttaagcacggagatattacgtaccgagtcgga
gataaagtgctgcagcttgtaaatcagccggatagcaacgtatttaacggagatatggga
gaaatcgtctcggttttctttgccaaagaaaatacggaaaaacaggatatgctggttatt
tcatatgaaggaaatgaagtaacttacacaaagcaagactttaatcaaataactcatgca
tactgctgttccattcataaatcacagggaagtgaatttcccattgttgtgcttccaatt
gttaaaagctattaccggatgctgcgacgcaatttactttataccgccgttacgcgaagc
aaacagtttttaattttatgcggtgaagacgaagcgtttcagcttggagtcagccgaaat
gaagacagcgttcgccaaacgaatttacagcccttgcttcgagaaagcttggataatgac
atagaagatcccgaaattccatttatgaaagatgcaaatattgggatggaaaacgttacg
ccgtatgatttcatgtaa
DBGET
integrated database retrieval system
