Priestia megaterium DSM 319: BMD_4765
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Entry
BMD_4765 CDS
T01219
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03030
DNA replication
bmd03430
Mismatch repair
bmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMD_4765 (dnaE)
03430 Mismatch repair
BMD_4765 (dnaE)
03440 Homologous recombination
BMD_4765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmd03032
]
BMD_4765 (dnaE)
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_4765 (dnaE)
Enzymes [BR:
bmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMD_4765 (dnaE)
DNA replication proteins [BR:
bmd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMD_4765 (dnaE)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMD_4765 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
ADF41588
UniProt:
D5DMX1
LinkDB
All DBs
Position
complement(4605506..4608856)
Genome browser
AA seq
1116 aa
AA seq
DB search
MPFVHLQLQSSYSLLSSSVRIHELVETAKKMNYEAIALTDENVMYGVIPFYKACVKAGIK
PIIGLTLSILEHEESERAYPLVLLAENDKGYENLLKLSSLVQTKEKHGVNKKWLHHYSGG
LIAITPGVTGEVETLLAENKFQDAKRVLQFFKKVYSQSLYISIQRHGQDETFINQQLTEL
AAEENIPLVATNQVKYLKKEDRDAYECLVAIRDGEKLHSDEEVKSKSSEYYFKSPDEMED
LFHDQHFLIEESIKIARRCELEISLGVMSIPKYPVPPSVTSSTYLRTLCEKGLQERVQVI
TEQYEERLDYELNIIENMRFSDYFLIVWDFMNYAHEHGILTGPGRGSAAGSLVSYALRIT
NVDPIQHQLLFERFLNPERISMPDIDIDFPDNKRDQVIQYVAQKYGGLHVAQIITFGTLA
AKAAVRDVGRVMGFDQEALNKMSKAIPTKPGTTLKSALRDSRVLQDYLSENEARKQWYNI
AMKIEGLPRHTSTHAAGVVISEKPLTQSVAVQEGHDDVYLTQYPMEALQDVGLLKMDFLG
LRNLTILDHILKKIERDMNRKLSLSHIPFNDQKTFELLSKGDTTGIFQLESDGMRRVLQQ
LKPTELEDIVAVNALYRPGPMENIPTYIKRKHGVEKVIYDHPTLKDILQSTHGVIVYQEQ
IMQIASKMAGFSLGEADLLRRAVSKKERAVLDRERAHFIQGSKKKGYDLSVANRVYDLIV
RFADYGFNRSHAVAYSMVAYQLAYLKAHYPLQFFSALLTSVIGNEGKIAQYINELKRNKI
QVLPPSINKSMYSFNVEGESIRYSLAAIKHIGAAAMQEITEERKKKRFEDLFDFCARVSQ
KAVNKKGLEALILSGGFDEFGENRATLLATIDVAFEHASLVLPDDDFGFGDEFSLKPKYM
EKEELKIEDRLQYEKDMLGFYLSSHPASQYEALNSFYSVVSLHDMKEYASGKAVSLLVFV
LEIRVIRTKKGEQMAFLRITDESGEGEVVAFPRVFEQNRLLFEQGTVLLIQGKIDERNGQ
QQIVCQRAEAASEAVQKLPSEELYLRIETKQGTEKLLHTIYQHFQSHRGKIPVKIYYEAE
SQLVKLPVHYSIERSDELIKTLKAMLGEKHVVFKKI
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttcacttgcagcttcaaagttcttatagcttattaagcagttccgttcgt
attcatgaacttgtagaaacagctaagaaaatgaactatgaagcgattgctttgactgat
gaaaacgtgatgtacggagtcattcctttttataaagcctgcgtgaaagcggggatcaag
ccaattattgggctcacattatcaatcctagaacatgaagaaagcgagcgagcgtaccct
ttagttttgttagcggaaaatgataagggatatgaaaatctattaaaactaagcagttta
gttcaaaccaaggaaaaacacggtgtaaataaaaaatggctccatcattacagcggcggg
ttgattgctattacacccggtgtaactggagaagttgaaaccctgctagcagaaaacaaa
tttcaagatgctaagcgagtgcttcaattctttaaaaaagtatattcgcagtctttgtat
atatcgatacagcgccacggacaggatgaaacttttataaatcagcagttaactgaactt
gctgctgaagaaaatattccgcttgttgcgacgaatcaagtgaaatatttaaaaaaagaa
gatcgagatgcgtatgagtgtttagtagctattcgagacggagagaaattacatagcgat
gaagaggtaaaaagtaagagcagcgagtactatttcaaatcacctgatgaaatggaagat
ctctttcatgaccagcattttttaatagaagaaagtataaaaatcgcaagacgatgcgag
ctcgaaatttctctaggagtaatgtccattccaaaatatcctgttcccccgtctgttaca
tcatcaacctacttgcgcactctctgcgaaaaaggattgcaagaaagagttcaagtgatc
acggaacaatatgaggaacgcttggattatgagctaaacattattgaaaatatgcgcttt
agtgattactttcttatcgtatgggattttatgaattatgctcatgaacacggtatttta
acgggcccaggccgaggttcagcggcaggctcactggtctcatacgccttgcgaattaca
aatgttgatccaattcagcatcagcttttatttgagcgctttttaaaccctgaacgtatt
tcgatgcctgatattgatattgattttcctgataacaaacgagatcaagtcattcagtat
gtggcgcaaaaatatggagggctgcatgtagctcaaatcattacatttggaacactagca
gctaaagcagccgtacgtgatgtagggagagtgatgggatttgatcaagaagcgctaaac
aaaatgtccaaagccattccaactaaaccaggtacaacgttgaaaagcgctcttcgtgat
tcaagagttcttcaagactatttatctgaaaatgaagccagaaaacaatggtacaacatt
gccatgaagatagaaggactgccaaggcatacttctacgcatgcagcaggcgttgtgatt
agtgagaagccgctgacgcaatctgtagctgtacaagaaggacatgacgatgtatatctg
actcaatatccaatggaagctctgcaagacgttgggcttttgaaaatggactttttaggt
ttgcgcaacttaaccattttagatcatattttaaagaaaattgagcgggacatgaatcga
aagctgtcactgtctcatataccatttaacgatcagaaaacttttgaactgctgagtaaa
ggggatacgaccggtatttttcagctagagtcagatggaatgagaagagtgcttcagcaa
ttaaaacctacagagctagaagatattgtagcagttaacgcgctgtatagacctgggccg
atggaaaatattccaacctatattaagcgcaagcatggagtggagaaggtaatatatgat
catcctacgcttaaagacattttacaatccacgcacggcgttatcgtgtatcaagagcaa
attatgcagattgcttcaaaaatggccggtttttctcttggagaagcagatttgttgaga
agagcagttagtaaaaaagaacgggcagtgctggatcgggaacgagctcattttatccaa
ggaagcaagaagaaagggtatgacctatccgttgctaatcgagtgtatgaccttattgtg
cgttttgctgattatggcttcaaccgaagtcatgctgttgcttacagtatggtagcctat
cagttagcttatttgaaagcacattacccgctgcagttcttttcagctttactaacgagc
gttattggaaatgaagggaaaattgctcaatatattaatgaactaaaaagaaacaaaata
caagttctcccgccttctattaacaagagcatgtattcgtttaacgtagaaggtgaaagt
ataaggtatagccttgcagcgattaaacatattggtgcagcagctatgcaggaaataaca
gaagagcgaaagaaaaaaagatttgaagacttatttgatttttgtgcccgtgtttcacaa
aaagccgtgaataaaaaggggcttgaagctttgattctatctggaggctttgatgagttc
ggagaaaatcgagctactttattagcaacgattgatgtagcgtttgaacatgcaagcttg
gtactcccagatgatgactttggatttggagatgaattttcgttaaaacctaaatatatg
gaaaaagaggaactgaaaatagaagatcggcttcagtatgaaaaagatatgctaggtttt
tatttatcaagccaccctgcttctcagtatgaagcactgaattccttttattctgttgtt
tctcttcacgatatgaaagaatacgcttcaggaaaagcggtctctcttttagtatttgtg
ttggaaattcgcgtcattcgaacgaaaaaaggagagcaaatggcctttttacgcatcacg
gatgaaagtggagaaggagaagttgttgcgtttccccgcgtatttgagcagaatcgtctg
ctgtttgaacaaggtacggttttactgatacagggaaagatagatgaaagaaatgggcag
cagcaaattgtttgtcaacgtgctgaagctgctagcgaggcggttcaaaaactaccgtca
gaagaattatacttacgtatagaaacaaagcaaggtacagaaaagctgcttcatactatt
taccagcactttcagtctcatagagggaaaattcccgtgaaaatttattatgaggcagaa
agtcaattggtcaagcttcccgttcactattctattgaacgaagcgacgagttaataaaa
actttaaaagcaatgctaggagagaagcacgttgtgttcaagaagatatag
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