Priestia megaterium DSM 319: BMD_4955
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Entry
BMD_4955 CDS
T01219
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd00300
Lysine biosynthesis
bmd00470
D-Amino acid metabolism
bmd01100
Metabolic pathways
bmd01110
Biosynthesis of secondary metabolites
bmd01120
Microbial metabolism in diverse environments
bmd01230
Biosynthesis of amino acids
Module
bmd_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BMD_4955 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BMD_4955 (dapF)
Enzymes [BR:
bmd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BMD_4955 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
ADF41755
UniProt:
D5DM00
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Position
complement(4774389..4775243)
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AA seq
284 aa
AA seq
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MKKFQFTKMHALGNNYIYVNMFEEHIEEQELAPLAVKVSNVYTGIGSDGMILICPSERAD
VKMRVFNNDGSEAKNCGNGLRCVAKYAYEHNLVTSERFFIETLSGVVEATVHPQGNEVPE
VTIDMGAPILAREQIPMTGASQDQVVNEEMEFGKERLKGTAVSMGNPHVVFYVNNIEQAP
LTTLGPVVEKDSRFPEGVNVEFVEVVNERELNFRVWERGSGITQACGTGACAAVVSSVLN
EKTKKDVPTVVHLAGGDLTIVWQNKGNVLMTGPANVICDGAYYY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttcagtttacaaaaatgcatgcacttggcaacaactatatctacgtaaat
atgtttgaagaacatatagaagagcaagagttagcaccgcttgctgtaaaagtctcaaat
gtttatacgggaattggatcggatggaatgattcttatttgtccatctgaacgtgcagat
gtgaaaatgcgcgtatttaataatgacggctcggaagcaaaaaactgcggaaacggttta
agatgtgtagctaaatatgcatatgaacataatttagtaacaagcgaaagattttttatc
gaaacgctttctggagttgtagaagcaacggtgcatccgcagggaaatgaagttccagaa
gtgacaatcgatatgggagcacctattttagctagagaacaaattccaatgacgggagca
agccaagaccaagtcgttaatgaagagatggaatttggaaaagaacggttaaaagggacg
gctgtatcaatgggaaatcctcacgttgtcttttacgtaaataatattgaacaagcgcct
cttactacattagggcctgtggttgaaaaagattcgcgttttccagaaggagtgaacgtt
gaatttgtcgaggtagtgaacgaaagagagctgaattttcgtgtatgggaaagaggttcg
ggtatcactcaagcatgtggaacaggagcatgtgctgctgttgtttcgtctgtattaaat
gagaagacgaaaaaagatgttcctactgtcgtacacctcgctggaggagatttaacgatt
gtttggcaaaataaaggcaatgtattaatgacaggtccagccaatgtgatttgtgacggc
gcgtattattattaa
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