Priestia megaterium DSM 319: BMD_5068
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Entry
BMD_5068 CDS
T01219
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BMD_5068 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmd03400
]
BMD_5068 (uvrA)
DNA repair and recombination proteins [BR:
bmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMD_5068 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BMD_5068 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
RsgA_GTPase
AAA_21
AAA_16
AAA_29
nSTAND1
AAA_25
AAA_22
AAA_23
DnaJ_CXXCXGXG
nSTAND3
ATPase_2
DUF4350
NACHT
cobW
Viral_helicase1
NB-ARC
Septin
MMR_HSR1
PRK
Motif
Other DBs
NCBI-ProteinID:
ADF41867
UniProt:
D5DNE0
LinkDB
All DBs
Position
complement(4877598..4880474)
Genome browser
AA seq
958 aa
AA seq
DB search
MAMEKIVVKGARAHNLQNIDIEIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGKP
ICPNHGIEITSQTIEQMVDRILEYPERTKLQVLAPVVSGRKGTHVKVLEDIKKEGYVRIR
VDGEMREITEEIELEKNKKHSIEVVIDRVVVKEGVAARLSDSLESALRLGEGKVIIDVIG
EEELLFSEHHACPKCGFSIGELEPRMFSFNSPYGACPTCDGLGTKLEVDKDLVIPNYDLT
LRQHAIAPWEPTSSQYYPQLLEAVCTHYGIDMDVPVRDIPEHLFDKVLYGSGKEKIYFRY
ENDFGQVRENHIEFEGVLRNVERRYHETSSDYIREQMEKYMAQQACPKCKGNRLKRESLA
VLIDEKHIGDTTRFSVKEAYDFFESLSLSEKDMKIADMILREIRERLSFLINVGLDYLTL
NRSAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIRTMQDMRDIGNT
LIVVEHDEDTMMAADYLIDIGPGAGVHGGAVVSQGTPQEVMEDENSLTGQYLSGEKFIPL
PAERRSIDKDRMIEIIGAKENNLKNVKAKLPLGMFTAVTGVSGSGKSTLVNDILHKSLAQ
KLHKAKSKAGEHKEIKGIEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEA
KVRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYK
DQNISDVLDMTVEDALHFFENIPKIKRKLQTIYDVGLGYITLGQPATTLSGGEAQRVKLA
SELHRRSTGRTLYILDEPTTGLHVDDIARLLKVLQRLVENGDTVLVIEHNLDVIKAADYL
LDLGPEGGDKGGQIVAMGTPEEVAKVKESYTGHYLKPILERDRKRMEKKVEKAEALTR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaaaaaatcgtggtaaaaggtgcacgagcccacaatttgcaaaatatcgat
attgaaatcccacgagacaaattagtggtattaacagggttgtcaggttctggtaaatct
tctttggcattcgatacaatctatgcagaaggacaaagacgttatgtcgagtcgctttcg
gcatatgcaagacagtttttaggtcaaatggataagccagatgtagattcaatcgaagga
ttgtcgcctgctatttcaatcgaccaaaaaacaacgagcagaaaccctcgttcaaccgtc
ggaactgtgacggaaatctatgactatttgcgccttttgtttgctcgtgtaggaaagccg
atttgtcctaatcatggaatcgaaattacatctcaaacgattgagcaaatggtagataga
attttagagtaccctgaacgcacaaagcttcaagtactggcacctgtggtatctggccga
aaaggcacccacgtaaaagtgttagaagatattaaaaaggaagggtacgttcgcattcga
gtagacggagaaatgcgtgaaataacagaagaaattgaactggaaaaaaacaaaaagcac
tccattgaagtagtgattgatcgcgttgtcgtaaaagaaggtgtagccgctcgtttgtcg
gactctttggaatcagctcttcgccttggagaagggaaagtaattattgatgtgataggt
gaagaagaactgctttttagtgagcatcatgcttgtccaaaatgtggtttctccattgga
gaacttgagccccgcatgttttcatttaatagtccgtacggggcgtgtccaacgtgtgac
gggttaggcacgaaattagaagtggataaagatttagttattcctaactatgacttaacg
cttcgtcagcacgcaattgccccttgggagccaacaagttctcaatactatccgcagctg
cttgaagccgtatgtacacattacggcatcgatatggacgtgccggtgcgagatatccca
gaacatttatttgataaagtattatatggcagcggtaaagaaaaaatttactttcgctat
gaaaatgattttggccaagtaagagaaaatcatatcgaatttgaaggcgtgcttcggaat
gtagagcgccgttatcatgaaacaagttcagattatatccgtgagcaaatggaaaagtac
atggctcagcaagcttgtccaaaatgtaaaggaaatcgcttgaaacgggaaagcttagcg
gtgcttattgacgaaaagcatataggagatacaacccgcttctcagtaaaagaagcatat
gatttttttgaaagtctcagcctatctgaaaaagacatgaagattgcggatatgatactg
cgtgaaattcgtgagcgtctaagctttctcattaacgtgggacttgattacttaacatta
aaccgctctgctggaactctctcaggaggagaagcacagcgaatccgtttagctactcaa
attggttctcgcttgacgggggttctttatattttagatgaaccttctatcggtcttcat
cagcgtgacaatgatcgcttaattcgcacgatgcaagatatgcgcgatattggaaatacg
ttgattgttgtagaacatgacgaagatacgatgatggcagctgattatttaattgatatc
ggaccaggagccggagtacacgggggtgctgttgtttctcaaggtacgcctcaggaagtg
atggaggatgaaaactctttaacgggtcaatatctatcaggagagaagtttattcctctt
ccagcggaaagacggtcaatagataaagatcgaatgattgaaattataggagcaaaagaa
aacaatttaaaaaatgtaaaagcaaagcttccgttaggtatgttcacggctgttacaggt
gtatctggatcaggtaagagtacgttggtaaatgatatccttcataaatcattggctcaa
aagctgcataaagcaaaaagcaaagcaggagaacataaagaaatcaaaggcattgaacac
ttagataaagtcattgatattgatcagtctcccataggccgtacgcctcgttcgaaccct
gcaacgtatacaggtgtattcgatgacattcgagatgtatttgcacaaacaaacgaagca
aaagtgcgcggatataaaaaaggccgttttagctttaacgtgaaaggcggccgctgtgaa
gcttgtcgaggagacggtattattaaaatcgaaatgcatttcctgccagatgtatacgtc
ccttgtgaagtctgccacggcaaacgatataaccgtgaaactttagaagtaaaatacaaa
gatcaaaacatttcagatgttttggatatgacggttgaagacgcgcttcacttctttgaa
aacattccaaagattaagcggaagctgcagacaatttacgatgtaggacttggctatatc
acgcttggacagccggctactactttatccggtggagaggcacagcgtgtaaagttagct
tcagagcttcaccgccgctcaacagggagaacgctgtacattttagacgaaccgactacc
ggtcttcatgtcgatgatattgcacgattattaaaagtgctccagcgtttagttgaaaat
ggagatacagttctagtgatcgaacataatttagacgtcattaaagctgctgattacctg
cttgatttagggcctgaaggtggagataaaggcggacaaattgtggctatgggtacgcca
gaagaagtggcaaaagtaaaagaatcctatacgggtcattatttgaagccaattttagaa
cgtgaccgtaagcgtatggagaagaaagttgaaaaagcagaggcattaactcgttaa
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