Priestia megaterium DSM 319: BMD_5158
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Entry
BMD_5158 CDS
T01219
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMD_5158 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmd03021
]
BMD_5158 (rho)
03019 Messenger RNA biogenesis [BR:
bmd03019
]
BMD_5158 (rho)
Transcription machinery [BR:
bmd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BMD_5158 (rho)
Messenger RNA biogenesis [BR:
bmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BMD_5158 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADF41957
UniProt:
D5DM73
LinkDB
All DBs
Position
complement(4971658..4972932)
Genome browser
AA seq
424 aa
AA seq
DB search
MNLTLSSLENMKLKELYEHAREYKVSYYSKLTKKELVFAILKAQAEQDGLLFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEAV
NGEDPETSKDRVHFPALTPIYPNEQMLLETQPRSFSTRIIDLISPIGFGQRGLIVAPPKA
GKTMLLKEIANSITTNHPDAELIVLLIDERPEEVTDIERSVDGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEDGGSLTILATALIDTGSRMDDVIYEEFKGTGNMELHLDRSLAEKRIFPAIDIRR
SGTRKEELLIPKEHLDHLWAIRKSMADAPDFVEKFLKRLRQTKTNEEFFSMLTEEKKTLL
ANKR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaacattatccagtttagaaaatatgaaattaaaagagctgtatgaacatgct
cgtgagtataaagtttcgtactatagtaaattaacgaaaaaagaacttgtctttgctatt
ttaaaggctcaagctgaacaagatgggcttttatttatggaaggcgttcttgaaattatt
cagtcagaaggattcggtttcctacgaccaattaactattcaccgagttcagaagatatt
tatatctcagcttcacaaattcgtcgcttcgatctgcgtaatggagacaaggtatcgggg
aaagttcgtcctccaaaagaaaatgagcgttactacggattattacatgtagaagcggta
aacggagaagatccggaaacgtcaaaagatcgcgtgcattttccagcgctaacgcctatt
tatccaaatgaacaaatgctactagaaactcagccaagaagtttctctactcgtattatt
gacttgatttcaccaattggatttgggcaaaggggactaattgtcgcgccgccaaaagcg
ggtaaaacgatgctgttaaaagaaattgccaatagcattacaacgaatcatcctgatgca
gaattgattgttcttcttattgatgagcgtcctgaggaagtgacggacattgagcgttcg
gttgacggtgatgttgtcagttctacatttgacgaagtgccagaaaaccacattaaagta
gcggaacttgtacttgaacgtgcgatgagattagtcgaacacaaaaaagatgttgtcatt
ttgatggatagcatcacaagacttgctcgtgcttataacttagttattccaccgagcggt
cgtacactatcagggggtattgacccggctgcttttcaccgtccaaaacgattctttgga
gctgctcgtaacattgaagatggaggcagcttaaccattctagcaacagccttaattgat
acaggctctcgtatggatgatgttatttatgaagaatttaaaggtacaggtaacatggaa
ctgcatctagatcgttcactagctgaaaaacgtatcttccctgcgattgacattcgtcgc
tcaggcacacgtaaagaagagctgctaattccaaaagagcatttagaccacttatgggca
attcgtaaatcaatggcagatgctcctgattttgtagaaaaattcttaaaacgtttacgt
caaacaaagacaaatgaagaattcttctcgatgttaacggaagagaaaaaaacgcttcta
gcaaataaacgataa
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