Priestia megaterium DSM 319: BMD_5179
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Entry
BMD_5179 CDS
T01219
Symbol
pbpF
Name
(GenBank) penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
bmd
Priestia megaterium DSM 319
Pathway
bmd00550
Peptidoglycan biosynthesis
bmd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bmd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BMD_5179 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bmd01003
]
BMD_5179 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bmd01011
]
BMD_5179 (pbpF)
Enzymes [BR:
bmd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
BMD_5179 (pbpF)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BMD_5179 (pbpF)
Glycosyltransferases [BR:
bmd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
BMD_5179 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
bmd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
BMD_5179 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
TIG_SUH
Form_Nir_trans
Motif
Other DBs
NCBI-ProteinID:
ADF41978
UniProt:
D5DM94
LinkDB
All DBs
Position
4998005..5000071
Genome browser
AA seq
688 aa
AA seq
DB search
METVLTEHLKKARRIFRILLVLGILAGALLLFAYISIFLYAKIAGPPPLNVSQTAVFYSA
NGKVLDEVHNGQKRYWVSLNQISPYVKDATLAVEDKRFYEHHGFDMHRIAGAVVADIKAM
GKVQGASTITQQYARNLFLEHDKTWTRKLQEALYTIRLEMNYSKDQILEGYMNTIYYGHG
AYGIEAAARLYFDKHAKNLTLSEASMLAGIPKGPSYYSPLIHQENAKKRQNIILSLMKED
GIITAKQATKALVTPLAFAKPAEKDPNKEDASYFMDAALAELKQDLGIDETMIYTNGLRV
YTTLDEKMQRTAEEKMKDVISSSSDVQSAFVAMNPKNGQVKALIGGRDYEKSPFNRATQA
IRQPGSTMKPFLYYAALKDGFTESTPMKSEETTFKLEDGISTYTPSNYHNYYADAPITMA
QAIALSDNIYAVKTHLFIGENRLIETAKTLGISSPLKKVPSLALGTSPVKVIDMVNAYGI
FANGGKEIRPTFIKRIETHDGEVVYQAPSEQKQVIDKRYAFLTTHLMTGMFNQKLNGYTT
VTGKPISKYVSRPYAGKSGTTSTDSWMIGYSPQLVSGVWVGYDQGRTMDDVAEKGYAKKM
WALFMEEALKGKKKEKFKAPNGLMSVNINPQNGKLASKSCPVQYKAYYLTGTQPKTYCTD
HIDHAAKTKKKQHEAENKKFHWLPKWFD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggtattaaccgaacatttaaaaaaggcaagacgcatcttccgaattcttctc
gtccttggtatattagcgggggctttattgttgtttgcctacataagcatctttctctac
gccaaaatcgctggcccccctccgctaaatgtttctcaaacagctgttttctactcagca
aacggtaaagttcttgatgaagttcacaatggacaaaagcgctactgggtttcacttaat
caaatttcaccttacgtaaaagatgcgactttagccgttgaagataagcgcttttatgag
catcacggctttgatatgcatcgaatcgccggagcagttgtagctgatataaaagctatg
gggaaagtacagggtgcgagtaccattactcagcagtatgcacgaaacttgtttttagag
cacgacaaaacatggactcgaaagcttcaagaagctctgtatacgattcgtttagaaatg
aattatagtaaagaccaaattctagaaggctacatgaatacgatttactacggccatgga
gcttatggaattgaagcggcagctaggctgtattttgataagcatgccaaaaatttgaca
ttaagtgaagcgagtatgttagcaggtattccaaaaggccctagctactactctcctctt
attcatcaagaaaatgcaaaaaaacgacaaaatatcattttatctcttatgaaagaggat
ggaattatcacagccaagcaagcaacaaaagcgcttgtaacacctctagcattcgcaaag
cctgccgaaaaagatcctaataaagaagatgcttcttactttatggatgcagcgctagca
gaattaaagcaagatttaggcattgacgaaaccatgatttacacaaatggacttcgcgtt
tatacaacgctggatgaaaagatgcagcgaacggctgaagaaaaaatgaaggatgttatc
agcagctcttcagacgtacaaagtgcatttgttgcgatgaatcctaaaaatggacaagtg
aaagctcttattggtggaagagattatgaaaagagcccgtttaatcgcgcgactcaagca
ataagacagcctggctcaacgatgaagccatttttatactatgcggcgttaaaagatggt
tttactgaatccactccaatgaaaagtgaagaaacgacgttcaaattggaagatggcatt
tcgacatacacacctagcaactatcacaattattatgcggatgctcctattacaatggcc
caagccatcgcactttcagacaacatttatgcggtaaaaacgcatttgttcattggggaa
aaccgcttgatcgaaaccgctaaaacacttggaatatcatcacctttaaagaaagttcca
tctttagctcttggaacttcgcctgtgaaagttattgatatggttaatgcgtacggcatc
tttgctaatggcggaaaagaaattcgtccaacatttattaaacgaattgaaacccatgac
ggagaagttgtttatcaagctccttccgaacagaaacaagtgattgataagcgctatgct
tttcttactacccatttaatgacaggcatgtttaatcaaaagctaaatggctatacaacc
gtcacaggaaagcctatttctaaatatgtatctcgtccttacgcgggaaaatccggcaca
acctctacggacagctggatgattggctactctccccagctcgtttcaggcgtttgggtt
ggatatgatcaaggaagaacaatggatgatgtagctgaaaaaggatacgcaaaaaaaatg
tgggcattatttatggaagaggctttaaaagggaagaaaaaagaaaagtttaaagcacca
aacggattaatgagcgtaaacattaatcctcaaaatggaaagttagcatccaaatcatgc
cctgttcaatataaagcttattatttaactggaacacagccaaaaacatattgtactgac
cacatcgatcatgcagcaaaaacgaagaaaaaacagcatgaagcagagaataaaaagttt
cattggctaccaaaatggtttgattaa
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