Brucella melitensis bv. 1 16M: BMEI1057
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Entry
BMEI1057 CDS
T00072
Name
(GenBank) ribonuclease e / zinc metalloprotease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bme
Brucella melitensis bv. 1 16M
Pathway
bme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMEI1057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bme03019
]
BMEI1057
03009 Ribosome biogenesis [BR:
bme03009
]
BMEI1057
Enzymes [BR:
bme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BMEI1057
Messenger RNA biogenesis [BR:
bme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMEI1057
Ribosome biogenesis [BR:
bme03009
]
Prokaryotic type
rRNA processing factors
BMEI1057
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
RhlB
Ogr_Delta
Motif
Other DBs
NCBI-ProteinID:
AAL52238
UniProt:
Q8YGV0
LinkDB
All DBs
Position
I:1099596..1102271
Genome browser
AA seq
891 aa
AA seq
DB search
MSNKMLIDASHPEETRVIVTRGNKIEEFDFESEHKKQLKGNIYLARVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRLALLEAEAKAARAEDDEDEPRAKSDRSERNDRAR
RNRRRGGRRDGQNGEAQANGADKDLPAAEPVGPGFADYVAGTPAAALTQKGDIISEALDN
GDDDDVENEEDMVESVGSEDALEELPTHTRTHRRQYNIQEVIKRRQILLVQVVKEERGNK
GAALTTYLSLAGRYSVLMPNTARGGGISRKITNPQDRKRLKEIVKELEVPQGMGVILRTA
GANRTKAEVKRDYEYLMRLWENVRTLTLQSTAPALVYEEGSLIKRSIRDIYNKDITEILV
SGENGYREAKDFMRMLMPSHAKVVQPYRDHIPIFTRNGVEAQLDRMLVPQVTLKSGGYLI
INQTEALVAIDVNSGRSTREHSIEDTALQTNLEAAEEVARQLRLRDLAGLIVVDFIDMEE
KRNNRAVEKKMKECLKDDRARIQVGRISHFGLLEMSRQRIRASVLESTMQVCPHCGGTGH
IRSDSSMALHIIRGIEDYLLRHSGFDIHVRTPAASALYVLNHKRQILADLEGRFGVEISI
DADESVGNQHFVIDKGAPSTRPVTPSAVQPMVYEDDIEDPEIPVEEDETEEEARTDVQAG
EERSEENDRKRRRRRRRRGGRERDGRDLSAQEEAVSEEASEEDNETDQANEAVSSASMSE
EDRRKKRRRGRRGGRKNRREDDNRARRIPDPEFVGYTPVLPVKAEESIGEVVETVETVEA
PVVEAAPEEKPEKPARKTRTRKKAVDEAPADEAAAPAEEVVPEKPKRRTRKAAAKPVVEA
EDVAEVKETVAAETQVETIAEPKSTEPVVTSSESEDRKPKRSGWWQKKGFF
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaaaatgcttatagatgcctcccacccggaggagacccgcgttatcgtcacg
cgcggcaacaagattgaagaattcgatttcgaatcggaacataagaaacagctgaaaggc
aatatctacctcgcacgcgtcacccgtgtcgaaccgtcgcttcaggctgcattcgtggaa
tatggcggcaatcgccatggcttcctggcattttccgaaattcatcccgactattaccag
attccggtcgccgaccgccttgccctgcttgaagcggaagccaaggccgcacgcgctgaa
gacgacgaggacgaaccgcgcgccaaaagcgaccgcagtgaacgcaacgaccgcgcgcgc
cgcaatcgccgtcgtggcggccgccgcgatggccagaatggcgaagcgcaggcaaacggt
gctgacaaggacctgccggcggcagagccggtcggtccgggctttgcggattacgttgcg
ggaacgcccgccgctgctctcacgcagaaaggcgatataatttccgaagccctcgacaat
ggcgatgacgatgatgtcgagaacgaagaggacatggtcgaatcggtcggctcggaagat
gctctggaagagcttccgacccacacccgcacccatcgccgccagtataatattcaggaa
gtcatcaagcgccgccagattcttctggtgcaggtggtcaaggaagagcgcggcaacaag
ggcgctgctctcaccacctatctttcgcttgccggacgttattcggtactgatgcccaac
accgcgcgcggtggcggcatttcgcgcaagatcaccaatccgcaggaccgcaagcgcctg
aaagagatcgtgaaggaactcgaagtgccgcagggcatgggtgtgatcctgcgcacggca
ggcgcaaaccgcaccaaggcggaagtcaagcgcgactatgaatatctgatgcgcctgtgg
gaaaacgtgcgcacgctgacgctgcaatcgacagcgcccgcgctcgtctatgaagaaggc
agcctcatcaagcgctctatccgtgatatttacaacaaggacatcacggaaatactcgtt
tccggcgagaacggctatcgcgaggccaaggatttcatgcgtatgctcatgccgagccat
gcgaaggtcgtccagccttaccgcgatcatattccgatcttcacgcgcaacggcgtggaa
gcgcagcttgaccgtatgcttgtgccgcaggtgacgctcaaatcgggcggctacctcatc
atcaaccagacggaagccctggttgccatcgacgtcaattcgggccgctcgacccgcgaa
cattcgattgaggacaccgcgcttcagaccaatctggaagcagccgaagaagttgcgcgc
cagttgcgccttcgcgaccttgcgggcctgatcgtcgttgacttcatcgacatggaagaa
aagcgcaacaatcgcgctgtcgaaaagaagatgaaggaatgcctgaaggatgaccgcgcc
cgcatccaggtgggccgcatctcgcatttcggccttctggaaatgtcgcgccagcgcatc
cgcgcatcggttctggaaagcaccatgcaggtctgcccgcattgcggcggcaccggacat
atccgttcggattcctccatggcgctccatatcatccgtggtatcgaagactatctgctg
cgccattcgggctttgatattcatgtccgcaccccggcagcgtccgcactttatgtgctc
aatcacaagcgccagattctggccgatctggaggggcgctttggcgtcgagatcagcatt
gatgccgacgaaagtgtaggaaaccagcactttgtcattgataagggtgcgccttctacc
cgccccgtcaccccgtcggcagtacagccgatggtctatgaggacgatatcgaagaccct
gaaatcccggtcgaagaagacgagaccgaagaagaagcaaggaccgatgttcaggctggc
gaagagcgcagcgaagaaaacgaccgcaagcgccgccgtcgtcgccgtcgtcgcggtggc
cgcgaacgtgacggtcgtgatctgtccgcgcaggaagaagccgtttcggaggaagcatcc
gaagaggataatgaaaccgatcaggccaatgaggccgtgtcatccgcttccatgagcgag
gaagatcgccgcaagaagcgtcgtcgcggccgccgtggcggacggaagaaccggcgtgaa
gacgacaaccgtgcgcgcagaattcctgatccggaattcgtcggttacacacctgttctg
ccggtaaaggccgaagaaagcatcggcgaagtagtggaaacggttgaaaccgtggaagca
cctgtcgttgaggccgcgccggaagaaaagcctgaaaagcccgcccgcaaaacgcgcacg
cgcaagaaggctgtcgacgaagcgcctgcagatgaagccgcagcgcccgccgaggaagtg
gtacctgaaaagccgaagcgccgtacacgcaaagctgccgccaagccggttgtggaagcc
gaagacgttgccgaggtgaaggaaacggttgcggcagaaacgcaggtggaaaccatcgcg
gaaccgaaaagcacagagccggtcgtaacctccagcgagagcgaagaccggaagccgaag
cgttcgggctggtggcagaagaagggctttttctaa
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