Burkholderia metallica: WJ16_00095
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Entry
WJ16_00095 CDS
T04871
Name
(GenBank) sugar-binding protein
Organism
bmec
Burkholderia metallica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF4329
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
AOJ30038
LinkDB
All DBs
Position
1:complement(25147..29892)
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AA seq
1581 aa
AA seq
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MTASSGVVLPKPTEVYVAPLLQIETIDVKAGVKACDRWLRAISHDFITIERLEMVANALP
VVANIMAAVDLVLDIKDMIEHGQSGKHPDVFDYLNLGLDLIGIIPIPPGTAEFRMGVRPV
MKLVRQKVVESGKALGEATLQVMQTALLQALIDSLSEQFAGRIQSFVDGVKKELDNLLRT
CADYIEKFMVGFARLFEEVAGEKQLSVAHNVRAVGQHAGQVASGFAAHDARKTFAGLGHL
IVDFVKIEAKELINTGTQAAKVLDLKYREPLLNMAKTLRTLVPVIKEKILALGGVDAGKI
GWLINLIQVAIDKKRDFLHRQRKHQTGIKEQGSTKVHRQEGEGQKESVRHTEEAEHPGPN
DCKLGCPASTPAAATRRSVGFALGDERVTHQDFVLPGVMPIIWSRTYRSFFDANDVHGEL
GARWITSLTTRIDMHASKLVYHDATGRSIDYPLLSPGDAHDDRGEGLTLLRLDESWMTVT
RGHELLEAYEKRGDAFRLAFIKDRSGNQLTLDYDAQQRLSRIIAPQAIVAFAYDDKHRIA
EVLHHDSEGTRVGTLARYEYSEDNDLVAATDRNGNRREYAYRHHLITRYTDRTGRGTNLE
WNGTGPKAKCVREYADGGSDETRFAWHPDFRMVSVTDALGNVTRHYYDRYGYPFRIIYPE
GSEEWMYRDVHHNLVQHTYPDGGNEKMAYDARGNMVRHQRVDGSVIEMEYDEKDQMIRIV
DPQGHAWKRGYDEAGNVVLETDPLGHETKYSYNAQGLPSEVIDAKGGTTVMAYDEAGRLT
AHTDCSGKTTQWKYDAQGRLVEATDAMGIATAFGYGANGWLNEVRTPAGVERFQYDAEGR
LLNYTDPMNRTTRYGYDAAGRLHARSDALGHTLNYGHDRLGRLVSLTDANQASYRFTYDP
VGRLLETVDFDGIVTRYGFDDETSRLSTIDVAGKVTRVEYDRAGRLTRRASGDADERFAY
DALGRLADAQNAFSRVQHFFDPVGNLVREHHAYDLFGVKRSYVWHHTYDELGNRKRTIRP
DGHAVDWLTYGSGHVHGMLLDGDERMQFERDDLHREVRRVLPSKLIQSTGYDSAGLIRSQ
TLQREHAPAPLSGRHYRYDLAGQLTHVEDSRRGLSDYRYDPIGRLIESIGPGGTERFAFD
PASNVIDARSPDHPQARTPASPVRPESTLPPQVSKVLGNLLRAYAGKQLEYDAQGNLVET
RAAGSLQRFEWDGFNRLARALTETEARRSEARYFYDAFGRRIAKEVDGVVTTYGWEGNAL
AYESGATSSTHYVYEADSFVPLAQYVGAAVEGVETPNHDAAMRHTPEDDPLRRIPEPKSK
AGVYYYHCDQIGTPQLLTDELGDVVWEASYKAWGDAREVIERVSRATGLTVRNPIRFQGQ
QLDDETGLAYNRHRYYAPESGRFISKDPVGLQGGLNTYRYGPNPTGWIDPLGTTCKKFKS
GRFATPDGAAKAALLRYNDKSIRDNLEYGGLIYRTPDGRFDYTKAIRGDGAEVNPWDSRA
PQPPNCAQEVGYWHTHGDHTDRRGNRTTRNRDSYDSNNFSDQDKAVAEMGLGDDPDYRGY
LGTPSDGHKGYHAATKAVYSL
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttcttcgggcgtcgttcttcccaagccgactgaggtctacgtcgcgccgttg
ctgcagatcgagaccatcgatgtaaaggccggcgtcaaggcttgtgaccgatggttgcgt
gccatcagccacgacttcatcaccatcgagcggctcgagatggttgccaacgcgctaccg
gtggtggcgaatatcatggcagccgtcgatctcgtgctcgatatcaaggacatgatcgag
catggacagagcggcaagcatcccgatgtgttcgattatctgaacctcggtctggacctg
atcggcatcatcccgattccacccggtactgccgaattccggatgggtgtgcgtccggtg
atgaagctcgtgcgacagaaggtcgtcgaaagcggcaaggcactcggtgaagcgacattg
caggtcatgcagaccgcactgctgcaggcactcatcgacagtctgagcgagcaattcgcc
ggccgtattcagagtttcgtcgatggcgtgaagaaagagctggacaacctgctcaggacc
tgcgccgattacatcgagaaattcatggtcggcttcgcgcgcctgttcgaggaggtggcg
ggcgagaagcaattgagcgtcgcgcacaatgtgcgagcggttgggcagcatgcggggcag
gttgcatctggcttcgcggcgcatgatgcacgcaagacgtttgcggggctcggtcatttg
atcgtcgactttgtgaagatcgaagcaaaggagctcatcaacacggggacgcaggcggcg
aaagtgctcgatctcaagtatcgcgagccgctgctgaacatggcgaagacgttgcgcacc
ttggtgccggtgatcaaggaaaaaatccttgcgctcggcggcgtagacgcgggcaagatc
ggttggctgatcaatcttatccaggtcgccatcgacaagaagcgcgactttttgcatcgt
cagcgcaaacaccagaccggaatcaaggagcaaggcagcacgaaggtgcaccgccaggag
ggggagggccagaaggaatcggtccggcatacggaagaggcggagcatcccggcccgaac
gactgcaagctcggatgtccggcgtcgacgcccgcggcggcgacgagacgttcagtcggg
tttgctctgggcgacgaacgggtgacccatcaggatttcgtcctccccggcgtgatgccg
atcatatggagccgcacctatcggtctttcttcgacgcaaatgacgtgcatggtgaactc
ggcgcccgatggatcacatcattgacgacgcgcatcgacatgcatgcatcgaagctcgta
tatcacgatgcgaccggtcgcagcatcgactatccgctgctttccccgggcgacgcgcac
gatgatcgcggcgaaggattgaccttgttgcggctggacgagtcgtggatgactgtcacg
cgaggccacgaattgcttgaagcatacgagaagcgtggcgacgcgtttcgtctcgcattc
atcaaggatcgctccggcaatcagctgacactcgactacgacgcgcagcaacgcctctct
cggatcatcgcgccacaagcgattgttgcgtttgcatacgacgacaagcatcgcatcgcc
gaggtgctgcatcacgatagcgaaggaacacgggtcggcacgcttgcgcgttacgaatac
agcgaggacaacgatctcgtcgcggcaacggatcgcaatggcaaccgccgtgaatatgcg
taccgtcaccacctgatcacgcgctatacggaccgcaccggtcgtggcaccaaccttgaa
tggaacggaaccggaccgaaggcgaaatgtgttcgcgaatacgcggatggtggcagcgat
gagacgcgcttcgcgtggcaccccgacttccggatggtgagcgtgaccgatgcgctcggc
aacgtcacgcgacactactacgaccgttatggctatccgttcagaatcatctatccggaa
ggcagcgaggagtggatgtatcgcgatgtgcaccacaatctcgtgcagcatacgtatccg
gatggcggcaacgagaagatggcgtatgacgcccgcggcaatatggtgcgccaccagcgt
gtcgacggcagcgtgatcgagatggaatatgacgagaaggatcagatgattcgcattgtc
gatccgcaggggcatgcatggaaacgcggctatgacgaagcggggaacgtcgtgctggag
acggacccgctcggccacgagacgaaatacagctacaacgcgcaggggctgccgagtgaa
gtgatcgatgcgaagggcggcacgacggtcatggcatacgatgaggctggacgactgact
gcgcataccgattgttcgggcaagacgacgcagtggaaatacgatgcgcaaggtcggttg
gtcgaagccacggatgcgatgggtatcgcgacagcgttcggctatggcgcaaacggctgg
ctgaatgaggtgcgtacgccagcgggcgttgaacgctttcaatacgacgccgaagggcgt
ctgctgaattacaccgatccaatgaaccgcacgacgcgctacggctacgatgcggcgggc
cggttgcatgcgcgcagcgatgccctcggccacacgctgaactacggccacgatcgcctc
ggccggctggtcagtctgaccgatgcgaatcaggccagctatcggttcacctatgacccc
gtcggccggctgctcgaaacggtcgattttgatgggatagtgacgcgttacggcttcgat
gacgaaacgagtcgcctgtcgaccatcgacgttgcgggaaaggtcacacgggtcgaatac
gatcgagcaggccggctgacacgccgcgcaagcggcgatgccgacgagcgctttgcttac
gatgcgctcggtcgtctggccgacgcgcaaaatgcattcagccgcgtgcagcatttcttc
gatccggtcggcaatctggttcgcgaacatcatgcgtacgacttgttcggtgtcaagcgc
agctacgtgtggcatcacacgtatgacgagctgggcaaccgcaagcggacgatccgaccg
gatggccacgcggtcgactggttgacctacggttccgggcatgtccatgggatgctgctc
gatggcgacgaacggatgcagttcgagcgggacgacctgcaccgtgaggtccggcgtgtg
ctgccgagcaaactgatccagagcacgggttacgattcggcgggcctgatccgcagccag
actcttcagcgcgaacatgcgcccgcaccgctgagcggcagacattaccgctacgatctc
gcgggtcagctgacgcatgtcgaagacagtcggcgcggactgagcgactatcgatatgat
ccgattggacgattgatcgagtcgatcgggcccggaggcacggagcggttcgcgttcgat
ccggctagcaatgtgatcgacgcacggagtcctgatcatcctcaggcgcgcacgccggcg
agcccggttcggcctgaaagcacgttgccaccgcaggtgtcgaaggtgctcggcaacctg
cttcgtgcgtatgcgggcaagcaactcgagtatgacgcgcagggtaacctcgtcgaaacc
cgagcggcgggtagcctgcagcgcttcgagtgggacggattcaatcgactggcacgagcc
ctgactgaaaccgaggcacgccgcagcgaggcacgttacttctacgatgcgttcgggcgg
cgaatcgcgaaggaagtcgatggtgttgtgacgacgtatggctgggaaggcaacgcgctc
gcatacgaaagcggcgccacgagcagtacgcattacgtgtacgaggctgattcgttcgtg
ccgctcgcccagtatgtcggcgcggcggtcgaaggtgtggaaacgccgaaccacgatgcc
gcgatgcgtcatacgcctgaggatgatccactgcggcgaattccggaaccgaagtcgaag
gcaggggtgtactactaccactgcgatcagatcggcacgccgcagttgttgaccgacgag
cttggggacgtggtgtgggaggccagctacaaggcttggggtgacgcgcgagaagtcatc
gagcgcgtatcgcgtgccacgggcttgacggtgcgcaatccgatccggttccaggggcag
caactggatgacgagaccgggcttgcctataaccggcatcgttactacgctccggagagc
ggacgtttcatttcgaaggatcctgtcggcttgcagggcggactgaatacgtatcggtac
ggccccaatcccacgggctggatcgatccgttgggcacgacctgcaagaagttcaagtcc
ggccgatttgcgacgccggatggtgcggcaaaggccgccttgctccgatacaacgacaag
tcgattcgcgacaacctggaatacggtgggctcatctatcggacaccggatggtcggttc
gactatacgaaggcgatccggggcgatggggctgaggttaatccgtgggattcacgcgcg
ccccaacctccgaattgcgcacaagaggtcggttactggcacacgcacggcgaccacaca
gatcgccgcggtaacagaacgacaaggaacagggactcctacgacagcaacaatttttcg
gatcaggacaaggcggtggccgagatggggctgggtgacgacccagactaccgaggttac
cttggcacgccaagtgatggccacaagggctaccatgccgccacgaaagcggtctattca
ctatga
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