Burkholderia metallica: WJ16_00465
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Entry
WJ16_00465 CDS
T04871
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
bmec
Burkholderia metallica
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmec03016
]
WJ16_00465 (gidA)
03036 Chromosome and associated proteins [BR:
bmec03036
]
WJ16_00465 (gidA)
Transfer RNA biogenesis [BR:
bmec03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
WJ16_00465 (gidA)
Prokaryotic type
WJ16_00465 (gidA)
Chromosome and associated proteins [BR:
bmec03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
WJ16_00465 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
DAO
HI0933_like
Thi4
Pyr_redox
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AOJ30097
UniProt:
A0ABT8PK18
LinkDB
All DBs
Position
1:108244..110214
Genome browser
AA seq
656 aa
AA seq
DB search
MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLV
KEVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL
FQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA
VSLSSRLKELKLPQGRLKTGTPPRIDGRSIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQ
LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP
EGLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLET
KAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVT
RGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETER
LKSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLAD
DPVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKL
NEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRPGTAEAATEQGDGTVPTQQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcccacagaatttgacgtcatcgtcgtcggtggcggtcacgccggcacggaa
gctgcgctggcgtctgcccgcatgggcgcaaagacactgctgctgactcacaacatcgaa
acgctcgggcagatgagctgcaatccgtcgatcggcggcattggcaagggccatctggtc
aaggaagttgatgcgctgggtggcgcgatggccgccgcaaccgacgaaagcggcatccag
ttccggattttgaactcgtcgaaagggccggccgtgcgcgcgacgcgtgcgcaggccgat
cgcatcctgtacaaagcggcgatccgccaccggctcgagaatcagccgaacctctggctg
ttccagcaggccgtcgacgacctgatggtcgaaggcgaccgcgtggtgggtgccgtcacg
cagatcggcatccgcttccgcgcccgtgcggtcgtgctgaccgccggcacgttcctcgac
ggcaagatccacgtcggcctgaacaactacacgggcggccgcgcgggtgatccggcggcc
gtgtcgctgtcgtcgcgcctgaaggaactgaagctgccgcagggccgcctgaagaccggt
acgccgccgcgtatcgatggccgttcgatcgatttctcgaagctggacgaacaaccgggc
gatcttgatccgatccccgtgttctcgttcctgggccgcgcggagcagcatccgcagcaa
ctgccgtgctgggtcacgcacacgaacgagcgcacgcacgacatcatccgcggcggcctc
gaccgatcgccgatgtatacaggcgtgatcgaaggcgtcggcccgcgctattgtccgtcg
atcgaggacaagatccaccggttcgcatcgaaggaatcgcaccagatcttcctggagccg
gaagggctgacgaccaacgagttctatcccaacgggatctcgacgagcctgccgttcgac
gttcagctcgaactcgtgcactcgatgcgcggcctcgagaacgcgcatatcctgcgcccc
ggctacgcgatcgagtacgactacttcgacccgcgcgcgctgaaggcgtcgctggaaacg
aaggcgattaacgggctgttctttgcgggccagatcaacgggacgaccggctatgaagag
gcggccgcccagggtttgctggccggcctcaatgcagggcgctatgtgcaggagaaggac
gcatggtgcccgcgccgagaccaggcctaccttggcgtgctggtcgacgatctcgtgacg
cggggtgtggccgagccgtaccggatgttcacgagccgcgccgagtatcgcctcagcctg
cgtgaagacaatgccgacatgcgcctgaccgagatcggccgcgaactgggcctcgtcgac
gacgcgcgctgggatgcgttcagccggaagcgcgacgctgtttcacgtgaaaccgaacgc
ctgaagtcgacgtgggtgacgccgaagacgttgccgccggaagaggcgaccgcgttgctc
ggcaaggcgatcgatcacgaatacagtctcgcggagctgctgcgccgtccgggtatcagc
tatgacggcgtgtgcggcctgaagggcggcgaatgtggccccgcagaaccattggccgac
gatccggtgctgctcgaacagatcaaggagcaggtcgagatcggcatcaagtatcagggc
tacatcgagcgccaggcttcggagatcgaacgcaacgatgcgaacgagaacacgcgcctg
ccggacggtatcgattaccgcgaagtccgcggcctgtcgttcgaggtgagccagaagctc
aacgaattccggccggagacgatcgggcaggcatcgcgcatctcgggtgtcacgccggcg
gcgatctcgctgctgatggtgcacctgaagcgccgcggcctgggccgccgtcctggcact
gccgaagcggcaacggagcagggggacggtaccgtcccgacgcaacaatga
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