Burkholderia metallica: WJ16_00555
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Entry
WJ16_00555 CDS
T04871
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bmec
Burkholderia metallica
Pathway
bmec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WJ16_00555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmec03400
]
WJ16_00555
Enzymes [BR:
bmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WJ16_00555
DNA repair and recombination proteins [BR:
bmec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WJ16_00555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_16
Zn_ribbon_6
Zn-ribbon_GIR1
DUF5817
ADDB_N
DZR
Motif
Other DBs
NCBI-ProteinID:
AOJ30112
LinkDB
All DBs
Position
1:127113..129374
Genome browser
AA seq
753 aa
AA seq
DB search
MSGTYLRVALDHPLATLFDYRCDAQPAPVPGTLVQVPFGKRQAVGLVCEVTTHTDVPPSR
LRAVDAICADLPPLSAEWLALVSFAADYYQRGRGEVALPALPQALRDAGRWGRLLAPEVR
YRPTEAGRAALPDALPARGAALRRLAQALVDIGSLALPDARALHPKAAATLDDWAARGWV
DVEEIGWADAPVPKAVDNLLAAGGRTVPPALTDQQAEALDAIRAAQGFAPFLLHGVTGSG
KTEVYLHALASLLDARPDAQALVLVPEINLTPQFEAAFRARFAGALADDAIVTLHSGLAE
GERARNWLAAHTGRARIVLGTRLAVLASMPTLALVVVDEEHEPAYKQQEGLRYSARDLAV
WRAKQLGITVVLGSATPSLESWWQAEQGRYTRLTLSRRAVADATLPSVRLIDLEEERRRG
RASMGGLSGPLVAALKSRLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHK
PEHALRCHHCGWEARIPRSCPECGNVDIAPLGRGTQRIEEALAEAVPGARVLRIDADSTR
RKGSAQALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFA
QLMQVSGRAGRAGLPGEVLVQTRYPRHALYHALGRQDYVGFANSTLGERRDAHLPPFVYQ
ALLRAEGRTLDAALAFLLQAAAALPGLPGADRVTVYDAVPMTIVKVANVHRAQLLLESAS
RAALQHALRAWQPALRALKGVQRWSVEVDPLDI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtacctatctgcgcgtcgcgctcgatcatccgctcgccaccctgttcgactac
cgctgcgacgcgcaaccggcgcccgtgccgggcacgctcgtgcaggtgccgttcggcaag
cggcaggcggttggcctcgtctgcgaagtgacgactcacaccgacgtgccgccgtcgcga
ctgcgcgcggtcgacgcgatctgcgccgacttgccgccgttgtcggcggagtggctcgcg
ctcgtatcgttcgccgccgattactaccagcgcgggcgcggcgaagtcgcgctgccggcg
ctgccgcaggcgctgcgcgatgccgggcgctgggggcggctgctcgcgccggaggtgcgc
taccggccgacggaggccggccgcgcggcgctgcccgatgcgttgcccgcgcgcggcgcc
gcgctgcggcggctcgcgcaggcgctggtcgacatcggctcgctggcgctgcccgacgcg
cgcgcgctgcatccgaaggcggccgcgacgctcgacgactgggcggcgcgcggctgggtc
gacgtcgaggaaatcggctgggccgacgcgcctgtgcccaaagctgtggataacctgttg
gcagccggtggacgaaccgtgccgccggcgctcacggaccagcaggccgaggcgctcgac
gcgatccgcgccgcgcagggtttcgcgccgttcctgctgcacggcgtgacgggcagcggc
aagaccgaggtctatctgcacgcgctcgcgtcgctgctcgatgcgcggccggacgcgcag
gcgctcgtgctcgtccccgaaatcaacctgacgccgcagttcgaagccgcgtttcgcgcg
cgcttcgcgggcgcactcgccgacgatgcgatcgtcacgctgcacagcgggctcgccgaa
ggcgagcgggcgcgcaactggctcgcggcgcacacgggccgcgcgcggatcgtgctcggc
acgcgcctcgcggtgctcgcgtcgatgccgacgctcgcgctggtcgtcgtcgacgaggag
cacgaacccgcatacaagcagcaggaagggctgcgctattcggcgcgcgatctcgccgtg
tggcgcgcgaagcagctcggcatcacggtcgtgctcggctcggcgacgccgtcgctcgaa
agctggtggcaggccgagcagggccgctacacgcggctcacgctgtcgcgccgcgcggtg
gccgacgcgacgctgccttccgtgcggctgatcgacctcgaagaggagcggcggcgcgga
cgcgcgtcgatgggcgggctgtcggggccgctcgtcgcggcgctgaagtcgcggctcgag
cgcggcgaacagagcctcgtcttcctgaaccggcgcggctacgcgccgcaactcgcgtgc
gatgcatgcggctgggttgcgggctgcccgcgctgcagcgcgtacgtcgtgctgcacaag
cccgagcacgcgctgcgctgccaccattgcggctgggaggcgcgcattccgcggtcgtgc
cccgagtgcgggaacgtcgacatcgcgccgcttgggcgcggcacgcagcgcatcgaggag
gcgctcgccgaggccgtgccgggtgcgcgcgtgctgcgcatcgacgcggacagcacgcgg
cgcaagggcagcgcgcaggcgctcttttccgatgtgcacgcgggcgaggtcgacatcctg
gtcggcacgcagatgatcgcgaaggggcacgatttccagcgcgtgtcgctcgtcggcgtg
ctcaacgccgacaccgcgctgttctcgcacgacttccgtgcgagcgaacggctgttcgcg
cagctgatgcaggtgagcggccgcgcgggccgcgccgggctgccgggcgaggtgctcgtg
cagacgcgctacccgcgccacgcgctgtaccacgcgctcgggcgccaggactacgtcggc
ttcgcgaattcgacgctcggcgagcgccgcgacgcgcacctgccgccgttcgtctaccag
gcgctgctgcgcgccgaagggcgcacgctcgatgcggcgctcgcgttcctgctgcaagcg
gcggccgcgctgccggggctgccgggcgccgatcgcgtgaccgtttacgacgcggtgccg
atgacgatcgtcaaggtcgcgaacgtccaccgcgcgcagttgctcctcgaaagcgcatcg
cgggcggcgctgcagcatgcgctgcgcgcatggcagccggcgctgcgtgcactgaagggc
gtgcagcggtggagcgtcgaggtcgatccgctggatatctga
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