Burkholderia metallica: WJ16_04885
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Entry
WJ16_04885 CDS
T04871
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bmec
Burkholderia metallica
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmec03032
]
WJ16_04885
03036 Chromosome and associated proteins [BR:
bmec03036
]
WJ16_04885
03400 DNA repair and recombination proteins [BR:
bmec03400
]
WJ16_04885
DNA replication proteins [BR:
bmec03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
WJ16_04885
Chromosome and associated proteins [BR:
bmec03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
WJ16_04885
DNA repair and recombination proteins [BR:
bmec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
WJ16_04885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AOJ30895
UniProt:
A0ABT8P7W0
LinkDB
All DBs
Position
1:1086716..1087039
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AA seq
107 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALAKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDER
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcgcagctggcatcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaaaacgatgctcgatgcgatgtccgacgccctggcgaaaggg
catcgcatcgaaattcggggtttcggcagctttggcctcaaccgtcgcccggcgcgcgtc
ggacgcaacccgaagtcgggggagaaagtgcaggtgcccgagaagttcgtgccgcacttc
aagcccggcaaggagttgcgcgaacgcgtcgacggccgcgccggtgaaccgctgaaggct
gacgatccggacgacgagcgttga
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