Burkholderia metallica: WJ16_05745
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Entry
WJ16_05745 CDS
T04871
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bmec
Burkholderia metallica
Pathway
bmec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WJ16_05745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmec03400
]
WJ16_05745
Enzymes [BR:
bmec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WJ16_05745
DNA repair and recombination proteins [BR:
bmec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WJ16_05745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
RecD_N
DEAD
AAA_22
AAA_25
MukB
GvpD_P-loop
Motif
Other DBs
NCBI-ProteinID:
AOJ31051
LinkDB
All DBs
Position
1:1272119..1274431
Genome browser
AA seq
770 aa
AA seq
DB search
MNASDDMLEFTGGLVARLPEPADFGIALAEGFARRIGDLSRRAGAPAAAARWAARAAFAT
SRATAGGHVCVALGALAQRYEAPPDEVRAALAASGVVAFGTLARGDERPLIVDRHDHLYL
SRYFDYERRLADALVAQAGTAVPDEALAPDRLRDSLARYFGPPTGEVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPALRVALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPAFTAAARTRIAQALGIDEAAFVAALPVRDDAA
TAAVPAAHPVSAAVPAPAPSSARATAARKPASRRKTDIRQASLFDDEPQGDEDSSTDVAP
PPAAGPVPAETGDSGEAVKAAEAAAWIEVGELAWLDAIELPPFDTGDAALASVTSMAPDA
TAAASAPAAAPAPLADCVVWLERNYRFGLDSPIGRLSLAIRSGDVQAALDALPADESAAA
SFHDDAGESLASSTVERLARRFGAYLDALRDALAAPVPDPLPLFDALNRFRILCATRSGL
RGAEHVNALVAAHVRHAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGVALPDAHGV
LRVWFRRADGTARAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLTRELVY
TAVTRARTRVQVIGPRRVLAQAVATRTQRDSGLAARVDEALERRRTEASR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctccgacgatatgctcgaatttaccggcggcctcgtcgcgcggctgcccgaa
cccgccgatttcggcatcgcgcttgcggaaggtttcgcgcgccgcatcggcgatctctcg
cgccgcgccggcgcgccggccgcggccgcgcgctgggccgcgcgcgccgcgttcgcgacg
agccgagcgaccgccggcggccacgtgtgcgtcgcgctcggtgcgctcgcgcagcgctac
gaagcgccgccggatgaggttcgcgcggcgcttgccgcgagcggcgtggtcgcgttcggc
acgctcgcgcgcggcgacgagcggccgctgatcgtcgaccgtcacgatcacctgtacctg
tcgcgctatttcgactacgagcgtcggcttgccgacgcgctcgtcgcgcaggccggcacg
gccgtgccggacgaagcgcttgcgcccgaccggttgcgtgacagcctcgcgcgttacttc
gggccgcccaccggtgaagtcgactggcagcgcgtcgcggcgatcgtcgcgctgacgggc
cgcgtgacgatcgtcagcggcggcccgggaacgggcaagacgacgaccgtcgtcggcgtg
ctggcctgcctgctcgacgcgcacccggcgctgcgcgtcgcgctggccgcgccgaccggc
aaagccgcgcagcggatgcaggaagcgctgcatgcgcgggccggcgacctgccgcccgaa
ctcgcggcgcgcctgcccgatacgtcgtacacgctgcaccggctgctgggcggcggcggt
gcggccggctttcggcaccatcgcgacaatccgttgccgtacgacctgatcgtcgtcgac
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctgctcgacgcgctcgcaccgggc
gcgcggctcgtgctgctcggcgacaaggaccagttggccgccgtcgaggcgggcgccgtc
ttcgcggagctgagcgcgcggccggcatttaccgccgcggcgcgtacgcgtatcgcgcag
gcgctcggcatcgacgaggcggcgttcgtcgcggcgttgccggtgcgggacgacgccgcg
accgcggccgttcccgcggcgcatccggtttccgccgcggtcccggcgccggcgccttcc
tctgcgcgtgcaacggctgcccgcaaaccggcgtcgagacggaaaaccgatatacggcag
gcatcgctcttcgacgacgaaccgcagggcgatgaagattcgtcgaccgatgtcgcgccg
ccgccggctgcaggccccgtgccggccgaaaccggcgactcgggggaggctgtcaaagcc
gccgaagccgccgcatggatcgaggtcggcgaactcgcgtggctcgacgccatcgagttg
ccgccgttcgacacaggcgacgcggcgcttgcgtcggtcacgtcgatggcgccggacgca
accgccgcggcgtccgcgcccgcggccgcaccggccccgcttgccgactgcgtggtctgg
ctcgaacgcaactaccgcttcggtctcgattcgccgatcgggcggctgtcgctcgcgatc
cgcagcggcgacgtgcaggccgcgctcgacgcgctgcccgccgacgagtcggctgccgcg
tcgttccacgacgatgcgggcgagtcgctcgcgtcgtcgacggtcgagcggctcgcgcgg
cgcttcggtgcctacctcgacgcgttgcgcgacgcgctggccgcgccggtgcccgatccg
ctgccgctgttcgacgcgctcaaccggttccggatcctgtgcgcgacccgcagcggcttg
cgcggcgcggagcacgtcaatgcgctcgtggccgcgcacgtgcgccatgcggcgcgcgta
ccgctcgcggtcggcgcgcactggttcacggggcggccgatcatggtgacgcgcaacgac
tatgcgctcggcttgttcaacggcgatatcggcgttgcgctgcccgatgcgcatggcgtg
ctgcgcgtgtggttcaggcgcgcggacggcacggctcgcgcggtatcgccggccgcgctg
cccccgcacgaaaccgctttcgcgctgacggtccacaaatcgcagggctcggaattcgac
gaggccgcgctcgtgctgccggcgtcgttcggccgcgtgctcacgcgcgaactcgtctat
acggccgtcacgcgtgcccgcacgcgcgtgcaggtgatcgggccgcggcgtgtgctcgcg
caggcggtcgcgacacgcacgcagcgcgactcggggctcgcggcgcgcgtcgacgaggcg
ctcgagcggcgccggacggaggcttcgcgatga
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