Burkholderia metallica: WJ16_06080
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Entry
WJ16_06080 CDS
T04871
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bmec
Burkholderia metallica
Pathway
bmec03030
DNA replication
bmec03430
Mismatch repair
bmec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WJ16_06080
03430 Mismatch repair
WJ16_06080
03440 Homologous recombination
WJ16_06080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmec03032
]
WJ16_06080
03400 DNA repair and recombination proteins [BR:
bmec03400
]
WJ16_06080
Enzymes [BR:
bmec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WJ16_06080
DNA replication proteins [BR:
bmec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WJ16_06080
DNA repair and recombination proteins [BR:
bmec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WJ16_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOJ31117
LinkDB
All DBs
Position
1:complement(1341846..1342580)
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIILDTETTGLNARTGDRLIEIGCVELLNRRLTGNNLHFYVNPERDSDPGALAVHGLT
TEFLSDKPKFAEVANQILDFVKGAELIIHNAPFDLGFLDAEFARLGMPPFTEHCGGVIDT
LVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQDSLVIDML
DDAGADGGAGNGQRVSLTALDLIVLAPSDDELAAHQAQLDELDKSVKGTCVWRQSADPDA
AEAA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatcattctcgataccgaaaccaccggcctgaacgcccgcacgggcgaccgc
ctcatcgaaatcggctgcgtcgagctgctgaaccggcggctcaccggcaacaacctgcac
ttctacgtgaaccccgagcgcgacagcgatccgggcgcgctggcagtgcacggcctcacg
accgaattcctcagcgacaagccgaaattcgcggaagtcgccaaccagatcctcgacttc
gtgaagggcgccgagctgatcatccacaacgcgccgttcgacctgggctttctcgacgcc
gaattcgcgcggctcggcatgccgccgttcaccgaacattgcggcggcgtgatcgacacg
ctggtgcaggccaagcagatgttccccggcaagcgcaactcgctcgacgcgctgtgcgac
cgcttcggcatcagcaacgcgcaccgcacgctgcacggcgcactgctcgactcggagctg
ctcgccgaggtgtatctggcgatgacgcgcggccaggacagcctcgtgatcgacatgctc
gacgacgcgggcgccgacggcggcgcggggaacggccagcgcgtgtcgctcacggcgctc
gacctgatcgtgctggccccgagcgacgacgaactcgccgcgcaccaggcgcagctcgac
gagctcgacaagtcggtcaagggcacctgcgtgtggcgccagtcggccgatccggacgcc
gccgaagcggcctga
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