Burkholderia metallica: WJ16_06970
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Entry
WJ16_06970 CDS
T04871
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmec
Burkholderia metallica
Pathway
bmec03420
Nucleotide excision repair
bmec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WJ16_06970
03430 Mismatch repair
WJ16_06970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmec03400
]
WJ16_06970
Enzymes [BR:
bmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WJ16_06970
DNA repair and recombination proteins [BR:
bmec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WJ16_06970
MMR (mismatch excision repair)
Other MMR factors
WJ16_06970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AOJ31271
LinkDB
All DBs
Position
1:1573051..1575414
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDASDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGENAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDSQEAGWIVEEIRSLINTGMARSEVAVLYRSNAQSRSI
EHTLMSSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYGCSMAAAIPYVTGKAGTSLGGFANLVAKMRADTQHMNLPDTVEHIVRASG
LADFYQGEREGQDRLENLQELVNAATAFIAEEGYGLDTPARSIPLRAGAIAAPELGTATD
DPALDVLDPVSPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGSRWGGRSDNAGYGRDWFARPGGGSREQIVDPAVSA
PLPAFADKQRAADAGFRVGQQVFHTKFGEGTVTALEGNGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgctcgccaatctgaaccccgaacaactcgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcgggggcgggcagcggcaagacccgcgtgctgatcacacgc
atcgcgtggctgatccagcagggctacgcatcgccgcccaccgtgctggccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcacgcactgg
cgcgatgccggcctgccgcagaccttccagatcctcgacacggccgaccagctgtccgcg
atcaagcggctgatgaaggccgcgaacgtcgacgacgaaaagtacccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgcccggacaaggtcgacgcgagc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcgtacgaccagcagtgccagcgc
gagggcgtcgtcgatttccccgagctgctgctgcgctgctacgaactgctcgcgtacaac
gcgccgctgcgcgcgcactaccaggcgcgcttccggcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctcgcgggcggcgagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgatgcggcgaaccagttgatctcgaacaacgcgcaccgt
ctcggcaagaacctgcgcaccgatgcgggccacggcgagcccgtgcgcgtgtacgaggcg
agcaccgattcgcaggaagcgggctggatcgtcgaggagatccgttcgctgatcaacacc
gggatggcgcgcagcgaagtggccgtcctgtaccgcagcaacgcgcagtcgcggtcgatc
gagcacacgctgatgtcgtcgggcattccgtaccgcgtgtacggcggcctgcgcttcttc
gagcgtcaggaagtcaagcatgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgcgcgcgtcgtgaacttcccgacccgcgggatcggcgcgcgctcgatc
gagcagctcgccgacgccgcgcgcctgtacggctgctcgatggccgccgcgattccgtac
gtgaccggcaaggccggcacgagcctcggcgggttcgcgaacctggtcgcgaagatgcgc
gccgacacgcagcacatgaacctgcccgacaccgtcgagcacatcgtgcgcgccagcggt
ctcgccgatttctaccagggcgagcgcgaaggccaggatcgcctcgaaaacctgcaggaa
ctcgtgaacgcggccaccgcgttcatcgccgaggaaggctacgggctcgacacgcccgcc
cggtcgatcccgctgcgcgcgggcgcgatcgcggcgcccgagctcggcacggccaccgac
gatccggcgctcgacgtgctcgatccggtgtcgcccgccgacccggcgcagaaccccgac
acgatgacgccgctcgcgggcttcctgtcgcatgcgtcgctggaggccggcgacaaccag
gcgcaggccgggcaggacgccgtgcaactgatgaccgtgcacgcggcgaaggggctcgaa
ttctcggccgtgttcatcacgggcctcgaggaagggctgttcccgcacgagaacagcgtg
ctcgaatccgacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgtgcg
aaggagcggctctacctgtcgttcgcgcaaagccggatgctgcacggccagacgcgctac
aacgtgcgctcgcgcttcttcgacgaactgccggagcacgtgctcaagtggctgacgccg
aaggtcgaggccggttcgcgctggggcggccgttcggacaacgccggctacgggcgcgac
tggttcgcgcggcccggcggcggcagccgcgagcagatcgtcgatccggccgtgtctgcg
ccgctgcccgcgttcgcggacaagcagcgggcggccgatgccggcttccgggtcggccag
caggtgttccataccaagttcggcgaaggcacggtcaccgcgctcgaaggcaacggcacc
gacgcgaaggcgcaggtgaaattcaagcggcacggcgagaagtggctcgcgctcgcggtc
gcgaagctgcaggcggtggaatga
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