Burkholderia metallica: WJ16_07265
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Entry
WJ16_07265 CDS
T04871
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bmec
Burkholderia metallica
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmec03016
]
WJ16_07265 (truB)
Enzymes [BR:
bmec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WJ16_07265 (truB)
Transfer RNA biogenesis [BR:
bmec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WJ16_07265 (truB)
Prokaryotic type
WJ16_07265 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AOJ31325
LinkDB
All DBs
Position
1:1637107..1638039
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AA seq
310 aa
AA seq
DB search
MTNAAPQRPRVPRRVLDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLDADKTYEATMRLGQRTATGDAEGDVIDTRPVECDRTAVEAALARF
TGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTILALDLLACDLPDVTFRVTCS
KGTYVRTLAEDIGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDAAESARDAWLQPVD
ALLSTFPAVRLDEASAKRFLHGQRLPLSELAPVAAADGERVRVYDATRLLGVARKANGVL
APERLVVTAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgcagcaccccaacgtccgcgcgtgccccggcgcgtgctggacggtgtcctc
ctgctcgacaagccggtcggcctgtcgagcaacgatgcgctgattcgcgccaagcgcctg
ctgctcgcgaagaaagccggccacaccggcacgctcgatccgctggcttccggcctgctg
ccgctgtgcttcggcgaggcgacgaagttctcgcaggatctgctcgacgcggacaagacc
tacgaggcgacgatgcgtctcggccaacgcacggccaccggcgacgcggaaggcgacgtg
atcgacacgcggcccgtcgaatgcgatcgcacggcggtggaagccgcgcttgcgcgcttc
accggcgagatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgacggcaagcca
ctgtacgaatatgcgcgcgccgggcaaaccgtcgagcgcgaggggcgcaacgtgaccatc
ctcgcactcgacctgctcgcgtgcgacctgcctgacgtgacgttccgcgtgacctgcagt
aaaggcacttacgttcgcacgctggcggaggatatcggcgaggcactcggttgcggcgcg
catctgacgatgctgcgtcgcacgggtgtcggcgcgctgacgctcgagcatgcggtgacg
ctcgatgcgctgtcggatgcggccgagtcggctcgcgatgcatggcttcaaccggtcgat
gcattgctgtcgacgtttccggccgttcgtctcgatgaagcgtccgcgaagcggtttctg
cacggccagcgtctgccgctgtcggaactcgcaccagtcgcggcggccgatggcgagcgc
gtgcgcgtgtacgacgcaacgcggttgctcggcgtcgcacgcaaggcgaatggcgtgctc
gcgccggaacggctcgtcgtgacggcagcgtga
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