Burkholderia metallica: WJ16_11720
Help
Entry
WJ16_11720 CDS
T04871
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bmec
Burkholderia metallica
Pathway
bmec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WJ16_11720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmec03019
]
WJ16_11720
03016 Transfer RNA biogenesis [BR:
bmec03016
]
WJ16_11720
Enzymes [BR:
bmec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WJ16_11720
Messenger RNA biogenesis [BR:
bmec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WJ16_11720
Transfer RNA biogenesis [BR:
bmec03016
]
Prokaryotic type
tRNA degradation factors
WJ16_11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AOJ33082
LinkDB
All DBs
Position
1:complement(2608728..2610875)
Genome browser
AA seq
715 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTRDQIKASSLDLV
VAGTERAVLMVESEADQLSEEVMLGAVVFGHEQMQVAIDAIHELVREGGKPEWDWQPAPK
NEALIARVTELAQNDLLAAYQLRDKQARSAKLKEVYAATSAKLEEDALAAGTAAADKATV
GNVLFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVK
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMAEAKKRIENITAEIEVGQVYEGTVLKLLDFGAIVNLIPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAATSQSDTPPQQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaagtcgcccgccaggcaagcggcgccgtgatcgtcgacgtcgaagacacc
gtcgtgctggcaaccgtcgtcggcgcgaagtcggcgaagccgggccaggatttcttcccg
ctgaccgtcgactacctcgagaagacctattcggccggcaagatcccgggcggcttcttc
cgccgtgaaggccgtccgtccgagcacgagacgctgacgtcgcgcctgatcgaccgtccg
ctgcgcccgctgttcccggaaggcttctacaacgaagtccaggtcgtgatccacgtgctg
tccgtgaacccggaaatcccggcggacatccccgcgctgatcggcgcatcggctgcgctc
gccgtgtcgggcctgccgttcaacggcccggtcggtgccgcgcgcgtggcgtacatcgac
aacgcgtacgtgctgaacccgacgcgtgaccagatcaaggcatcgagcctcgacctcgtc
gtcgccggtacggaacgtgcggtgctgatggtcgagtcggaagccgaccagctgtcggaa
gaggtgatgctgggcgccgtggtgttcggccacgagcagatgcaggtcgcgatcgacgcg
atccacgaactggtgcgcgaaggcggcaagcccgagtgggactggcagccggcgccgaag
aacgaagcgctgatcgcgcgcgtgaccgagctggcgcagaacgacctgctcgccgcttac
cagctgcgcgacaagcaggcgcgttcggcgaagctgaaggaagtgtacgcagcgacgtcg
gcgaagctcgaggaagacgcgctggcggccggtacggctgcggctgacaaggccactgtc
ggcaacgtgctgttcgacatcgaagcgaagatcgtccgttcgcagatcctgaacggcgag
ccgcgtatcgacggccgagacacgcgcaccgtgcgcccgatcgagatccgcaccggcgtg
ctgccgcgtacccacggctcggcgctgttcacgcgcggcgagacgcaggcgctggttgtc
gcgacgctcggcacgaagggtgacgagcagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgcccccgttcgcgaccggcgaaacgggccgcgtc
ggttcgccgaagcgccgcgaaatcggccacggccgcctcgcgaagcgcgcactggtcaag
tgcctgccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgag
tcgaacggttcgtcgtcgatggcatcggtgtgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcacacgtcgcgggtatcgcgatgggcctgatcctcgaaggcaac
aagttcgcggtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcacggagcagggcgtgacggcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcatgcacatc
ctcggcaagatgacgtcggcggtttcgggtgcgaacacgcagctgtcggagttcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgatccgcgcgctgacggaagaaaccggcacgacgatcgacatctcggacgacggc
gtcgtgacgattgcaagcacgagcagcgagggcatggccgaagcgaagaagcgtatcgag
aacatcacggcggaaatcgaagtcggccaggtgtacgaaggcacggttctgaagctgctc
gatttcggtgcgatcgtgaacctgattccgggcaaggacggtctgctgcacatctcggaa
atcgtcaacgagcgtgtgaaggacatcaacgactacctgaaggaaggccagcaagtgaag
gtcaaggtcatccagacggacgaaaagggtcgcgtgcgtctgtcggcgaaggcgctgctg
aatgaagcagcggcgacgtcgcagtcggacacgccgccgcagcagtaa
DBGET
integrated database retrieval system
