Burkholderia metallica: WJ16_14160
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Entry
WJ16_14160 CDS
T04871
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bmec
Burkholderia metallica
Pathway
bmec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WJ16_14160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmec03400
]
WJ16_14160
DNA repair and recombination proteins [BR:
bmec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WJ16_14160
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WJ16_14160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
AAA_21
nSTAND1
DnaJ_CXXCXGXG
BCA_ABC_TP_C
nSTAND3
RsgA_GTPase
AAA_25
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AOJ32578
LinkDB
All DBs
Position
1:3140557..3143442
Genome browser
AA seq
961 aa
AA seq
DB search
MEQIRIRGARTHNLKNVNLDLPRHKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHDIPLEAQSVSQMVDAALALPEETKLMILAPVVADRKGEHAELFEDMQAQGFVRFRVR
SGGGAANEGVAKIYEVESLPKLKKNDKHSIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDREYLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYEFDIDAAFEDLPEKIRKVLLFGSG
KQTIPFSYINERGRTTIREHVFEGIIPNLERRYRETDSVAVREELSKYQNNQPCPSCDGT
RLRREARHVRIGTGDHARGIFEISGWPLRDALGYFDGLTLEGAKREIADKVIKEIVARLT
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
ATLKHLRDLGNSVIVVEHDEDMIRTADYVVDMGPGAGEHGGVIVAEGTPKQVQSNPQSLT
GQYLVGKRTIEYPDERLAPDPERMLRIVDAHGNNLKHVDLELPVGLLTCITGVSGSGKST
LINDTLYHAVARHLYGSSAEPAPHEAIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFT
PIRELFSGVPTSKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGK
RYNRETLEVQYKGKNISEVLDMTVEHAYEFFSAVPVIARKLKTLLDVGLGYIRLGQSATT
LSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIE
HNLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAKTKASFTGKYLAPLLKRSTRKVAA
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaacagatccgtattcgtggggctcgtacccacaacctgaaaaacgtcaatctcgac
ctgccgcgccacaagctgatcgtgattaccgggttgtccgggtcgggcaagtcgtcgctc
gcgttcgacaccctttatgccgaaggccagcgccgctacgtcgaaagcctgtccgcgtat
gcccgccagttcctgcagctgatggagaaacccgacgtcgacctgatcgaaggcctgtcg
ccggcgatctcgatcgagcagaaggcgacgtcccacaacccgcgttcgaccgtcggcacg
gtcacggaaatccacgactacctgcgacttttgtacgcacgtgtcggcacgccgtactgc
cccgaccacgacatcccgctggaagcgcagagcgtgtcgcagatggtcgacgcggcgctc
gcgctgcccgaggaaaccaagctgatgatcctcgcgcccgtggtcgccgaccgcaagggc
gagcacgccgagctgttcgaggacatgcaggcacagggtttcgtgcgctttcgcgtgcgc
tcgggcggcggcgccgcgaacgaaggcgtcgcgaagatctacgaggtcgagtcgctgccg
aagctgaagaagaacgacaagcactcgatcgacgtcgtcgtcgaccgcctgaaggtgcgc
ccggacatgaagcagcggctcgccgaatcgttcgagacggcgctgcgcctcgccgacggc
cgcgcgatcgcgctcgagatggacaccgaccgcgagtacctgttcagctcgaagttcgcg
tgcccgatctgctcgtactcgctgcaggagctcgagccgcggctgttctcgttcaacaac
ccgatgggcgcgtgcccggaatgcgacggcctcggccagatcacgttcttcgacccgaag
cgggtcgtcgcgcacccgtcgctgtcgctcgcggccggcgccgtgaaaggctgggatcgc
cgcaaccagttctacttccagatgctgcagagtctcgcggcattctatgaattcgacatc
gacgccgcattcgaggatctgccggaaaagatccggaaggtgctgctgttcggctcgggc
aagcaaacgatcccgttctcgtacatcaacgagcgcggccgcacgacgatccgcgagcac
gtgttcgaagggatcatcccgaacctcgagcgtcgctaccgcgagaccgattcggtcgcg
gtgcgcgaagagctgtcgaagtaccagaacaaccagccgtgcccgtcgtgcgacggcact
cgcctgcgccgcgaagcgcgccacgtgcggatcggcaccggcgaccacgcgcgcggcatc
ttcgagatcagcggctggccgctgcgcgacgcgctcggctatttcgacggcctgacgctc
gaaggcgcgaagcgcgagatcgccgacaaggtgatcaaggaaatcgtcgcgcgcctcacg
ttcctgaacaacgtcggtctcgactacctgtcgctcgagcgcagcgcagagacgctgtcg
ggcggcgaggcgcagcgcatccggctcgcgtcgcagatcggctcgggcctgaccggcgtg
atgtacgtgctcgacgagccgtcgatcggcctgcaccagcgcgacaacgaccgcctgatc
gcaaccctcaagcacctgcgcgacctcggcaactcggtgatcgtcgtcgagcacgacgag
gacatgatccgcacggccgactacgtcgtcgacatgggcccgggcgcgggcgagcacggc
ggcgtgatcgtggccgaaggcacaccgaagcaggtacagtcgaacccgcagtcgctcacc
ggtcagtacctggtcggcaagcgcacgatcgagtatccggacgagcggctcgcgcccgat
cccgagcggatgctgcgcatcgtcgacgcgcacggcaacaacctgaagcacgtcgatctc
gagctgccggtcggcctgctgacctgcatcaccggcgtgtcgggctccggcaagtcgacg
ctgatcaacgacacgctgtaccacgcggtcgcgcgccacctgtacggttcgtcggccgag
ccggcgccgcacgaggcgatcgagggcctcgagcacttcgacaaggtgatcaacgtcgac
cagtcgccgatcggccgcacgccgcgctcgaacccggccacgtatacgggcctgttcacg
ccgatccgcgagctgttctcgggcgtgccgacctcgaaggagcgcggctacgatccgggc
cgcttctcgttcaacgtgaagggcggccgctgcgaatcgtgccagggcgacggcgtgctg
aaggtcgagatgcacttcctgccggacgtctacgtgccgtgcgacgtgtgccacggcaag
cgctacaaccgcgaaacgctcgaagtgcagtacaagggcaagaacatcagcgaagtgctc
gacatgaccgtcgagcacgcgtacgagttcttcagcgcggtgccggtcatcgcgcgcaag
ctgaagacgctgctcgacgtgggcctcggctacatccgcctcggccagtcggccacgacg
ctgtcgggcggcgaggcgcagcgcgtgaagctgtcgctcgaactctcgaagcgcgacacc
ggccgcacgctgtacatcctcgacgagccgaccaccggcctgcacttccacgacatcgcg
ctgctgctggaagtgatccaccggctgcgcgaccagggcaacacggtcgtgatcatcgag
cacaacctcgacgtgatcaagacggccgactgggtgatcgacctcggccccgaaggcggc
gccggcggcggccagatcatcgcgcagggcacgcccgagcaggtcgcgaagacgaaggcg
agcttcaccggcaagtacctcgcgccgctgctcaagcgttcgacccgcaaggtcgcggcg
ggctga
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integrated database retrieval system
