Burkholderia metallica: WJ16_19015
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Entry
WJ16_19015 CDS
T04871
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmec
Burkholderia metallica
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmec03032
]
WJ16_19015
03400 DNA repair and recombination proteins [BR:
bmec03400
]
WJ16_19015
Enzymes [BR:
bmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WJ16_19015
DNA replication proteins [BR:
bmec03032
]
Prokaryotic type
DNA Topoisomerases
WJ16_19015
DNA repair and recombination proteins [BR:
bmec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WJ16_19015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOJ33866
LinkDB
All DBs
Position
3:713774..714769
Genome browser
AA seq
331 aa
AA seq
DB search
MRHVDDSRPGYTRRRLRNGFAYYRQDGSRIRDADEIARINALAIPPAYTDVWICMDPLGH
LQATGRDARGRKQYRYHPQWRATRDANKYARMAAFARALPRIRARVARDLALPGMPRDKI
VATIVRLLDTTLARIGNAEYARDNASYGLTTLRKRHVKLRAGQVRLRFAGKSGIEHDVTV
DDARVARIVRRCAELPGHELFQYVDDDGARHAVGSSDVNDYLRAASGTDFTAKDYRTWAG
SVHALALLRRAPHRGVTHARKQIVETVRAVADLLRNTPAVCRRCYIHPAVLDAFEAGMLA
TLAVMRTPRGLRVDEAAFVALLASASRRAAK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ctgcgccacgtcgacgatagccgccccggctacacgcgccgccgcctgcgcaatggcttc
gcgtactaccggcaggacggttcacggatccgcgacgccgacgaaatcgcccggatcaac
gcgctcgcgatcccgcccgcctataccgacgtgtggatctgcatggatccgctcggccac
ctgcaggcgacgggccgcgacgcgcgcgggcgcaagcagtaccgctaccacccgcagtgg
cgggcgacgcgcgacgcgaacaagtacgcgcggatggcggccttcgcacgcgcgctaccg
cgtatccgcgcccgcgtcgcgcgcgatctcgcgttgccgggcatgccgcgcgacaagatc
gtcgcgacgatcgtccgcctgctcgacacgacgctcgcccggatcggcaatgcggaatac
gcgcgcgacaacgcgtcgtacggattgaccacgctgcgcaagcgtcacgtgaagctccga
gccggccaggtgcgcctgcgcttcgccggcaagagcggcatcgagcacgacgtgacggtc
gacgacgcccgggtcgcgcggatcgtacggcgctgcgccgagctacccggccacgagctg
ttccagtatgtcgacgacgacggcgcgcgccacgcggtcggctcgtccgacgtgaacgac
tacctgcgcgcggcaagcggcaccgatttcaccgcgaaggattaccggacgtgggccggc
agcgtgcatgcgctcgcgttgctgcggcgcgcgccgcatcgcggcgtcacgcacgcgcgc
aagcagatcgtcgagaccgtgcgcgcggtggccgacctgctgcgcaacacgccggccgtg
tgccggcgctgctacattcatccggcggtgctcgacgcgttcgaagcgggcatgctggcg
acgctcgcggtgatgcgcacgccgcgcgggctgcgcgtggacgaagcggcgttcgtggcg
ttgctcgcgtccgcgagccgccgcgcggcaaaatga
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