Burkholderia metallica: WJ16_19170
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Entry
WJ16_19170 CDS
T04871
Name
(GenBank) endopolygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bmec
Burkholderia metallica
Pathway
bmec00040
Pentose and glucuronate interconversions
bmec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
WJ16_19170
Enzymes [BR:
bmec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
WJ16_19170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
AOJ33867
LinkDB
All DBs
Position
3:747808..749973
Genome browser
AA seq
721 aa
AA seq
DB search
MTTFPFSRPNRRPRALGLLAALLATAAALTACGGDDSSSTGSAGGGAPTAPPATNVFQVG
TTTVDASLPAEPALPADTEVCSTLEAANTLVSRPDGSLPPEADPSTAGVGKAVSAATANP
DQARIQAALDACGAAVDAEVGATIAAADAAATAAQKAAAVPNANVAGASGEELAKPKYRA
SKFAVRLVVNHGGPGNGFISGPLTLPSGVTLWIDKGVTLYASRDVKAYSPNVAGPYCGNT
AVSATKAGSSSNCAALITGTNLVNAAVVGDGRIDGRGYAELVTSDAKYPLMKVDLTCSNT
YAAYKAGTVAPDGTACDDGGTVVDSKSTVRNMTWWDLAYLGNMVQNGTTGFGSQSNFRLM
VFNYAKNLTLYRITLNNSPNFHVVPSGVDGLTIWNVKVQTPTLAAFANPAGNGNPLYNGQ
TFNADNVKNTDAFDPGSASKPIAAALSTGSATTSAAAISFDGYLKNFVFAYNYVSTGDDD
IALKGSNNPAPAGSGLFGIDGNRDVRSDRKWGIAIAHNHIYWGHGISIGSETNGGVTNVQ
VYDNSFQDSEEGLRIKSDYARGGEVSNIRYSNICIRDAKNALLFTPYYSTKAVPASGPLY
PNFHDISLANVVIQGSAGVKLQGFEANTGGYGEPAFPLVMSLSDVVADTPDGIATIASDA
NLTLHNVNLPVFPSTANRVVVNGTAVRTIDPASVLDCSKAFVDFPGIDQSNPFGSTWAPA
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgtttcccttttcccggccgaaccggcgcccgcgcgcgctcggcctgctcgcc
gcgctgctcgcgacggccgcggcactcaccgcgtgcggcggtgacgattcgagcagcacc
ggcagcgccggcggcggcgcgcccaccgcgccgcccgcgaccaacgtgttccaggtcggg
accaccaccgtcgacgcgagcctgccggccgaacccgcgctgcccgccgacacggaggtg
tgcagcacgctcgaggccgccaatacgctcgtgagccgccccgacggctcgctgccgccg
gaggccgacccgtcgacggccggcgtcggcaaggccgtgtcggccgcgacggccaacccc
gaccaggcacgcatccaggccgcgctcgacgcgtgcggcgcggcggtggatgccgaggtc
ggcgcgacgatcgcggcggcggacgccgcggccaccgccgcgcagaaggcggcggccgtg
ccgaacgcgaacgtcgccggcgcgtccggcgaggagctggccaagccgaagtaccgcgcg
agcaagttcgcggtgcgcctcgtcgtcaaccatgggggcccgggcaacggcttcatcagc
gggccgctgacgctgccgtccggcgtcacgctgtggatcgacaagggcgtcacgctgtat
gcgtcgcgcgacgtgaaggcgtattcgccgaacgtcgcgggcccgtactgcggcaatacg
gccgtcagcgcgacgaaggccggcagctcgtcgaactgcgccgcactgatcaccggcacg
aacctcgtgaacgcggcggtggtcggcgacggccgcatcgacgggcgcggctacgcggag
ctcgtcacgtccgatgcgaaatacccgctgatgaaggtcgacctgacctgctcgaacacg
tacgcggcctacaaggccggcacggtggcgcccgacggcaccgcatgcgacgacggcggc
accgtcgtcgattcgaaatcgacggtgcgcaacatgacgtggtgggatctcgcgtatctc
ggcaacatggtgcagaacggcacgaccggcttcggctcgcagtcgaatttccggctgatg
gtgttcaactacgcgaagaacctcacgctgtaccgcatcacgctgaacaacagcccgaat
ttccacgtggtgccgagcggcgtcgacgggctgacgatctggaacgtgaaggtgcagacg
ccgacgctcgccgcattcgcgaacccggccggcaacggcaatccgctgtacaacgggcag
accttcaacgcggacaacgtgaagaacaccgatgcgttcgacccgggctccgcgtcgaag
ccgattgcggcggcgctgtcgaccggcagcgcgacgacgtccgccgccgcgatctcgttc
gacggctacctgaagaacttcgtgttcgcgtacaactacgtgagcaccggcgacgacgac
atcgcgctgaagggcagcaacaatccggcgcccgccggttcggggctgttcggcatcgac
ggcaatcgcgacgtgcgcagcgatcgcaaatgggggatcgcgatcgcacacaaccacatc
tactgggggcacggcatctcgatcggcagcgagaccaacggcggcgtgacgaacgttcag
gtgtacgacaattcgttccaggattcggaggaagggctgcgcatcaagtccgactatgcg
cgcggcggcgaagtgagcaacatccgctattcgaacatctgcatccgcgacgcgaagaac
gcgctgctgttcacgccgtactacagcacgaaggccgtgcccgcgagcgggccgctgtac
ccgaacttccacgacatctcgctcgcgaacgtcgtgatccaaggctcggccggcgtgaag
ctgcaggggttcgaagcgaacaccggcggctacggcgagccggccttcccgctcgtgatg
tcgctgagcgacgtggtggccgacacgcccgacggcatcgcgacgatcgcgtccgacgcg
aacctcacgctgcacaacgtgaacctgccggtgttcccgtcgacggcgaaccgggtcgtc
gtcaacggcacggcggtccggacgatcgatccggccagcgtactcgactgcagcaaggcg
ttcgtcgacttccccggcatcgaccagtcgaacccgttcggttcgacgtgggcgccggcg
ctgtaa
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