Burkholderia metallica: WJ16_23480
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Entry
WJ16_23480 CDS
T04871
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bmec
Burkholderia metallica
Pathway
bmec03030
DNA replication
bmec03410
Base excision repair
bmec03420
Nucleotide excision repair
bmec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WJ16_23480
03410 Base excision repair
WJ16_23480
03420 Nucleotide excision repair
WJ16_23480
03440 Homologous recombination
WJ16_23480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmec03032
]
WJ16_23480
03400 DNA repair and recombination proteins [BR:
bmec03400
]
WJ16_23480
Enzymes [BR:
bmec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WJ16_23480
DNA replication proteins [BR:
bmec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WJ16_23480
DNA repair and recombination proteins [BR:
bmec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
WJ16_23480
NER (nucleotide excision repair)
GGR (global genome repair) factors
WJ16_23480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Spo0A_C
Motif
Other DBs
NCBI-ProteinID:
AOJ34542
LinkDB
All DBs
Position
2:832604..835357
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVTDRVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLAQYDSLDGVIEHAGDIKGVVGDNLRRALDFLP
LGRKLVTVETACDLAPHLESIEASLKTDGEARDLLRDIFARYGFKTWLREVDSAPAEGGG
ADAPEGEPAPVVAADIVREYDTIQTWAQFDAWFSKIDAAALTAFDTETTALDPMLARLVG
LSFSVEPGKAAYLPVAHRGPDMPEQLPLDEVLARLKPWLESADRKKVGQHLKYDAQVLAN
YGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
AQAAEYAAEDADVTLQLHHALYPQVAREAGLERVYREIEMPVSLVLRKMERTGVLIDDAR
LHAQSTEIATRLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPSTGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FTRYPGVAQYMEDTRAAAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDKLASRMIMQVHDELVLEVPDDELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgtgacgacctttatgccgactat
aaggcaaaccgtccgtcgatgccgcccgacctcgcactgcaggtcgagccgatccacggc
gcggtgcgcgcgctcggctggccgctgctgatggtcgaaggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagcggagcggcatggaatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcgcagctcgtgaccgaccgcgtcacgctcgtcaacacgatgaccaac
gagacgctcgatcgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcgcatcatc
gactacctcgccctgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcgga
ccgaagacagccgtgaaatggcttgcgcagtacgacagcctcgacggcgtgatcgagcat
gcgggcgacatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcaagctcgtgaccgtcgagacggcgtgcgacctcgccccgcatctcgaatcg
atcgaagcgtcgttgaagaccgacggcgaagcgcgcgacctgctgcgcgacatcttcgcg
cgctacggcttcaagacctggctgcgcgaagtcgacagcgcgccggcggaaggcggcggc
gcggatgcaccggaaggcgagccggcgccggtggtggcggccgacatcgtgcgcgaatac
gacacgatccagacctgggcgcaattcgacgcgtggttctcgaagatcgacgcggccgcg
ctgaccgcgttcgacacggaaaccaccgcgctcgacccgatgctcgcgcggctcgtcggc
ctgtcgttctcggtcgagccgggcaaggcggcgtacctgccggtcgcgcaccgcggcccc
gacatgcccgaacagctcccgctcgacgaggtgctcgcgcggctgaagccgtggctcgaa
tcggccgatcgcaagaaagtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacggcatcgcactgaacggcatcgagcacgacacgctgctcgaatcgtacgtgctcgaa
tcgcatcgcacgcacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtatgaagacgtggccggcaagggcgcgaagcagatcggtttcgacgaagtggcgctc
gcgcaggccgccgaatacgcggccgaagatgcggacgtgacgctgcagctgcatcacgcg
ctgtatccgcaggtggcgcgcgaagcgggcctcgagcgcgtgtatcgcgagatcgagatg
ccggtgtcgctcgtgctgcgcaagatggagcgcacgggcgtgctgatcgacgatgcgcgc
ctgcacgcgcagagcaccgaaatcgcgacgcgcctgatcgagctcgaagggcaggcgtac
gagctggccggcggcgaattcaatctcggctcgccgaaacagatcgggcagatcttcttc
gagaagctgcagttgccggtcgtgaaaaagacgccgagcggcgcgccgtcgaccgacgag
gaagtgctgcagaagctggccgaagactacccgctgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctataccgacaagctgccgcgcatggtgaatccgtcg
acgggccgcgtgcacacgaattacgcgcaggccgtcgcggtcacgggccgcctggcgtcg
aacgatccgaatcttcagaacattccggtgcgcacggccgagggccggcgcatccgcgag
gcgttcatcgcgtcgccgggccaccggatcgtgtcggccgattattcgcagatcgaactg
cggatcatggcgcacatctcgggcgacgcgtcgctgctgcgcgcgttctcgcagggcgag
gacatccaccgcgcgacggccgccgaggtgttcggcgtgacgccgctggaggtcaattcc
gaccagcgccggatcgctaaggtgatcaacttcgggctcatctacgggatgagcgcgttc
gggcttgcatcgaacctcggcatcacgcgcgatgccgcgaagctctatatcgaccgctat
ttcacgcgctatccgggcgtcgcgcagtacatggaagacacgcgcgcggcggccaaggag
aagggctacgtcgaaaccgtgttcggtcgccgcctgtggctgcccgagatcaacggcggc
aacggcccgcgtcgccaggcggccgagcgcgcggccatcaatgcgccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtggacgactggctcacgcgcgacaag
ctggcgtcgcggatgatcatgcaggtgcacgatgaactggtgctcgaggtgccggacgac
gaactgtcgctggtgcgcgagaaactgccggaaatgatgtgcggcgtggcgaagctgaag
gtgccgctggtggccgaagtgggcgccggtgcgaactgggaagaggcacactga
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