Burkholderia metallica: WJ16_23550
Help
Entry
WJ16_23550 CDS
T04871
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
bmec
Burkholderia metallica
Pathway
bmec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WJ16_23550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmec03021
]
WJ16_23550
Transcription machinery [BR:
bmec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WJ16_23550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GSH-S_ATP
KIND
Motif
Other DBs
NCBI-ProteinID:
AOJ34555
LinkDB
All DBs
Position
2:850519..852570
Genome browser
AA seq
683 aa
AA seq
DB search
MTKKLNEVSVEDDANQSDEQPAAAAAPGKSKVRDRRAKEKALLKEAFATSTPGTAEELEE
RRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAET
LLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIA
KRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLLDPNASDSADTDGFS
AKEAEAIENEDEEAEEEEEEEEEEEDDGAAQASANAAQLEALKRASLEKFSQISEWFDKM
RRAFEKEGYKSKAYLKAQETIQSELMTIRFTARTVERLCDTLRAQVDEVRQVERQILHIV
VDKCGMPRSEFIARFPGNETDLDWAEKIMAEGHSYSAVLSRNVPAIREQQQRLLDLQARV
VLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIG
LMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQIL
QETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAP
ADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIE
AKALRKLRHPSRSDKLKSFLEGN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaagctgaacgaagtatccgtcgaagacgacgcaaatcagagcgacgagcag
cccgcagcggcggctgcaccgggcaaatccaaggtgcgcgatcgtcgcgccaaggaaaag
gcgctgctgaaggaagcgttcgcgacgagcacgccgggtacggccgaggagctcgaagag
cgccgcgtgaaactgcgcgcgctgatcaagctcggcaaggagcgcggcttcctgacgtac
gccgaaatcaacgaccacctgccggacaacttcaccgagaccgaagccctggaaggcatc
atcggcacgttcaacgacatgggcgtggcggtctacgagcaggcgccggacgcggaaacg
ctgctcctgaacgacaacgcgcccgccgcgtcgtcggacgatgaagtcgaagaggaagcg
gaagtcgcgctgtccaccgtcgattcggaattcggccgtacgaccgatccggtccggatg
tacatgcgtgaaatgggcaccgtcgagctgctcacgcgcgaaggcgaaatcgagatcgcg
aagcggatcgaggacggcctgcgccacatggtgatggccatctccgcgtgcccgacgacg
atcgccgacatcctcgcgatggccgaacgcgtcgcgaacgaagagatccgcgtcgacgag
ctcgtcgacggcctgctcgatccgaatgcgtcggactccgccgataccgacggcttctcc
gcgaaggaagcggaagccatcgagaacgaggacgaggaagccgaagaggaagaggaagaa
gaggaagaggaggaagacgacggtgccgcgcaggcatcggccaacgccgcccagctcgaa
gccctcaagcgcgcgtcgctcgagaagttctcgcagatcagcgagtggttcgacaagatg
cgccgcgcgttcgaaaaggaaggctacaagtcgaaggcctacctgaaggcgcaggaaacg
atccagagcgaactgatgacgatccgcttcaccgcgcgtaccgtcgagcgcctgtgcgac
acgctgcgtgcgcaggtggacgaagtgcgtcaggtcgagcgccagatcctgcacatcgtc
gtcgacaagtgcgggatgccgcgttcggaattcatcgcgcgcttcccgggcaacgagacc
gatctcgactgggccgagaagatcatggccgaaggccattcgtacagcgcggtgctgtcg
cgtaacgttccggcgatccgcgaacagcagcagcgcctgctcgacctgcaggcgcgcgtc
gtgctgccgctgaaggacctgaaggaaaccaaccgccagatggcggccggcgaactgaag
gcacgccaggcgaagcgcgaaatgaccgaggcgaacctgcgtctcgtgatctcgatcgcg
aagaagtacacgaaccgcggcctgcagttcctcgacctgatccaggaaggcaacatcggt
ctgatgaaggcggtggacaagttcgaataccgtcgcggctacaagttctcgacctatgcg
acgtggtggatccgccaggccatcacgcgctcgatcgcggaccaggcgcgcacgatccgt
attccggttcacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagattctg
caggaaaccggtctcgagccggatccggcaacgctcgccgaaaagatggaaatgccggaa
gacaagatccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatc
ggtgacgacgacgactcccatctcggcgacttcatcgaggacaccaacacggtcgcgccg
gcggatgccgcgctgcatgcgagcatgcgcgacgtcgtgaaggacgtgctcgattcgctg
acgccgcgcgaggcgaaggtgctgcggatgcgcttcggcatcgagatgagcaccgatcac
acgctcgaggaagtcggcaagcagttcgacgtcacgcgcgagcggatccgtcagatcgag
gccaaggcgctgcgcaagctgcgtcacccgagccgttccgacaagctgaagtcgttcctc
gaagggaactga
DBGET
integrated database retrieval system
