Burkholderia metallica: WJ16_30230
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Entry
WJ16_30230 CDS
T04871
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
bmec
Burkholderia metallica
Pathway
bmec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WJ16_30230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmec03021
]
WJ16_30230
Transcription machinery [BR:
bmec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WJ16_30230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_ner
Sigma70_r4_2
ABATE
Motif
Other DBs
NCBI-ProteinID:
AOJ35763
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All DBs
Position
2:2408532..2410412
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AA seq
626 aa
AA seq
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MPSSLDAGPAREGNGGPPRDADAVRAEHLHALIALSIDRGYVTHGDIADALPDDAAEGAD
FDAAASMLRELGIEVREDAGARTAWTLDGHFAQASDVTSPLAHAASPLAADDLLAGRTRD
PVRLYLREMSATPLLERDEEIALALRLESGRAACVDALSRDPAALAAIAAIADDIRAGKV
ASSVYVTGLMGNAESSAGAPPTLPDDSTMESLAPEDAGGLPLDSPAWRDTVVDALERAGE
LAAAMHRALHADGFASAGYRALLREAAASTGRIRFTSRAIERIGHANGERATRARKFEKR
LVDVLARSGIRTEPARHDLFTRCDDVRAWLHACGAAHPECSAALARHAPALIEARSALAR
AAAQSPLPLDIAIALDARVSRIEHAMQPARTKLFQSNLRLVVSVAKRYADRGLPFPDLIQ
EGNIGLMKAVDRYDPRRGFKFSTYATWWIRQAITHALADLGRTIRVPAHTVDSLNKLSRL
ARIHRQRTGDVADARALATQMRLPVDKVRELMGIVREPISADMPVSPDRDLTLCDVTIDP
DAPTPEEAASAGQLREAVASLIDSLPARQAWILRLRYGIDVESEYSLREIGRQLNLSAER
VRQLEVAALERIRQFRHAPALRSLLA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgccaagctcgcttgatgccgggcccgctcgcgagggcaacggcggcccgccccgcgac
gcggatgccgtacgcgcggaacacctgcatgcgttgatcgcgctgagcattgaccgcggg
tacgtcacgcacggcgacatcgccgatgcgttgcccgacgatgcagccgaaggcgcggat
ttcgatgcggccgcgtcgatgctgcgcgagcttggcatcgaggtgcgcgaggatgccggc
gcgcgcaccgcatggacgctcgacgggcatttcgcgcaagcgtcggacgtcacgtcgccg
ctcgcccatgccgcatcgccgctcgcggccgacgatctgctcgcgggccggacccgcgac
ccggtccggctctatctgcgggaaatgagcgccacaccgctgctcgaacgcgacgaagag
atcgcgctcgcgcttcgtctggaaagcggtcgcgcggcatgcgtcgatgccttgagccgc
gacccggccgcgctcgccgccatcgcggcgatcgcggacgacatccgcgccggcaaggtg
gcttcgtcggtttacgtgacggggttgatgggcaatgccgaatcgtccgcgggcgcgccg
ccgacgctacccgacgattcgaccatggaatccttggcaccggaagacgccggcggcctg
ccgctcgacagcccggcgtggcgcgatacggtcgtcgacgcgctcgaacgtgccggcgag
ctggccgcggcgatgcaccgcgcgttgcacgccgacggtttcgcgtcggccggttaccgg
gcgctgctgcgcgaggccgcggcgtcgaccggcaggatccggttcacgtcgcgcgcgatc
gaacgtatcggacatgcgaacggcgagcgcgcgactcgggctcgcaagttcgaaaaacga
ctcgtcgacgtgctcgcccgttcggggatacgtaccgaacccgcacgccacgacctcttc
acgcgatgcgacgacgtacgcgcgtggttgcacgcatgcggcgccgcacatcccgaatgc
agcgccgcactcgctcgccatgcgcctgcgctgatcgaagcgcgcagcgcgctcgctcgc
gcagccgcccagtcgccgctgccgctcgacatcgcgatcgcgctcgacgcacgggtgtcg
cgtatcgaacatgcgatgcaacctgcgagaacgaagctgttccagagcaatctgcggctc
gtcgtgtcggtcgccaaacggtatgccgatcgcggcctgccgttccccgatctgatccag
gaaggcaatatcggcctgatgaaagccgtcgatcgctacgaccctcggcgcggcttcaaa
ttctcgacgtacgcaacctggtggatccggcaggcgatcacgcacgcgctcgccgatctg
ggacgcacgatacgcgtgcccgcgcatacggtcgattcgctgaacaagctgtcacggctc
gcacgaatccaccggcaacgaaccggcgacgtcgccgacgcgcgggcgctcgccacgcag
atgcggctgcccgtcgacaaggtgcgcgagctgatgggtatcgtgcgtgagccgatctcc
gccgacatgccggtttcgcccgatcgcgaccttacgttatgcgacgtcacgatcgatccc
gatgcgccgaccccggaggaagccgcgagtgccggccagttgcgtgaggcggttgcgtcg
ctgatcgacagcctgccggcgcgccaagcctggattcttcgcctgagatacggtatcgat
gtcgaaagcgagtattcgctgcgcgagatcggccgccaactgaacctgtcggccgaacgc
gttcgccaactcgaggtggcggcgctggagcgcatccggcaattcaggcacgcgccggcg
ctgcggtcgctactcgcctga
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