Burkholderia metallica: WJ16_30405
Help
Entry
WJ16_30405 CDS
T04871
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bmec
Burkholderia metallica
Pathway
bmec00260
Glycine, serine and threonine metabolism
bmec01100
Metabolic pathways
Module
bmec_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
WJ16_30405
Enzymes [BR:
bmec01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
WJ16_30405
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
WJ16_30405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
HI0933_like
FAD_binding_3
Pyr_redox
GIDA
DAO
Thi4
AlaDh_PNT_C
NAD_binding_7
XdhC_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AOJ35792
LinkDB
All DBs
Position
2:complement(2459796..2462807)
Genome browser
AA seq
1003 aa
AA seq
DB search
MSQKDRLGTGGRINRAIPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
VTADVAEPNAVVQLESGPYTVPNARATEIELYQGLVATSVNAEPTLENDKYAINQKFSRF
LPAGFYYKTFMWPRKMWPKYEEKIREAAGLGKAPEALDADRYDKCYAHCDVLVVGGGPSG
LAAAHAAATAGARVILVDDQRELGGSLLSCRAEIDAKPALQWVEKIEAELRKLPDVTILS
RSTAFGYQDHNLVTVTQRLTDHLPVSMRKGTRELLWKVRAKQVILATGAHERPIVFGNND
LPGVMLAGAVSTYVHRFGVLPGRNAVVFTNNDRAYQAALDLKACGAKVTVVDSRASSNGA
LPAAAKRQGVTVMSGAVVTSASGKWRVSSVDVASHSNGQVGGKLQTLPCDLVAMSGGFSP
VLHLFAQSGGKACWNDEKACFLPGKPLQAEASVGAAAGEFGLARALRLAVDAGVEAAKAA
GFTAAQRAVAPQVAEAVEGALQPLWLVGSREAAARGPKQFVDFQNDVSAADILLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAGALGKTIPETGTTTFRPNYTPVSFGTFAG
RELGDFLDPIRKTCVHEWHVEHGALFEDVGNWKRPWYFPKNGEDLHAAVKRECLAVRNSV
GILDASTLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLA
DQHFMMTTTTGGAARVLTWLERWLQTEWPDMKVRLSSVTDHWATFAVVGPKSRKVVQKVC
QDIDFGNDAFPFMSYRNGTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSITPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQVSAVDPTPMIGHVTSSYYSPILKRSIALA
VVKGGLNKMGESVVIPLADGKRITAKISSPVFYDTEGVRQHVE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgcctcggcaccggtggccgcatcaatcgcgcgattccgttgacg
ttcacgttcaacggccgcacgtatcagggcttccagggcgacacgctcgcgtccgcgctg
ctcgcgaacggcgtgcacttcgtcgcgcgcagcttcaagtaccaccgcccgcgcgggatc
gtgacggcggacgtcgcggaaccgaacgccgtcgtgcagctcgaatcgggcccgtacacg
gtgccgaacgcgcgcgcgaccgagatcgagctgtaccaggggctcgtcgccaccagcgtg
aacgccgagccgacgctcgagaacgacaagtacgcgatcaaccagaagttctcgcgcttc
ctgccggccggcttctactacaagacgttcatgtggccgcgcaagatgtggccgaagtac
gaagagaagatccgcgaggcggcggggctcggcaaggcgcccgaggcgctcgacgccgat
cgctacgacaaatgctacgcgcactgcgacgtgctcgtcgtcggcggcggcccgtcgggt
ctcgcggccgcgcatgcggccgccacggccggcgcgcgcgtgatcctcgtcgacgaccag
cgcgaactcggcggcagcctgctgtcgtgccgcgcggagatcgatgcgaagccggcgctg
cagtgggtcgagaagatcgaggccgaactgcgcaagctgcccgacgtgacgatcctgtcg
cgcagcacggcgttcggctaccaggaccacaacctcgtgacggtcacgcagcgcctgacc
gatcacctgccggtgtcgatgcgcaagggcacgcgcgagctgctgtggaaggtgcgcgcg
aagcaggtgatcctcgcgaccggcgcgcacgagcgcccgatcgtgttcggcaacaacgac
ctgccgggcgtgatgctcgcgggcgccgtgtcgacctacgtgcatcgcttcggcgtgctg
ccgggccgcaacgcggtcgtgttcacgaacaacgaccgcgcgtatcaggccgcgctcgac
ctgaaggcatgcggcgcgaaagtgacggtcgtcgattcgcgcgcctcgtcgaacggcgcg
ctgccggccgccgcgaagcggcagggcgtgacggtgatgagcggagccgtcgtcacgagc
gcatcgggcaagtggcgcgtatcgtcggtcgacgtcgcgtcccactcgaacggccaggtg
ggcggcaagctgcagacgctgccgtgcgacctcgtcgcgatgtcgggcggcttcagcccg
gtgctgcacctgttcgcgcagtcgggcggcaaggcgtgctggaacgacgagaaggcatgc
ttcctgccgggcaagcccttgcaggcggaagcgagcgtcggcgcggcggccggcgaattc
ggcctggcgcgcgcgctgcggctcgcggtcgatgcgggcgtggaagccgcgaaggcggcg
ggcttcacggccgcgcagcgcgcggtcgcgccgcaggttgccgaagccgtcgaaggcgca
ctgcagccgttgtggctcgtcggcagccgcgaggccgcggcgcgcgggccgaagcagttc
gtcgatttccagaacgacgtgtcggcggccgacatcctgctggccgcgcgcgaaggcttc
gagtcggtcgagcacgtgaagcgctatacggcgatgggcttcggcaccgaccagggcaag
ctcggcaacatcaacgggatggcgattctcgcgggcgcgctcggcaagacgattccggaa
acgggcacgacgacgttccgcccgaactacacgcccgtgtcgttcggcacgttcgcgggc
cgcgagctgggcgatttcctcgacccgatccgcaagacctgcgtgcacgagtggcacgtc
gagcacggcgcgctgttcgaggacgtcggcaactggaagcggccgtggtacttcccgaag
aacggcgaggatctccatgcggccgtgaagcgcgaatgcctggcggtgcgcaacagcgtc
ggcatcctcgacgcgtcgacgctcggcaagatcgacatccagggcccggacgcggtgaag
ctgctgaactggatgtacacgaacccgtggaacaagctcgaagtgggcaagtgccgctac
gggctgatgctcgacgagaacggcatggtgttcgacgacggcgtgacggtgcgcctcgcc
gaccagcatttcatgatgacgaccacgacgggcggcgcggcgcgcgtgctgacgtggctc
gaacgctggctgcagaccgagtggccggacatgaaggtgcggctgtcgtcggtcaccgat
cactgggcgacgttcgcggtggtcggcccgaagagccgcaaggtcgtgcagaaggtgtgc
caggacatcgacttcggcaacgacgcgttcccgttcatgagctaccgcaacggcaccgtc
gcgggcgcgaaggcgcgcgtgatgcggatcagcttctcgggcgaactggcctatgaagtg
aacgtgccggcgaatgcgggccgcgcggtgtgggaagcgctgatggcggccggcgccgag
ttcgacatcacgccgtacggcaccgagacgatgcacgtgctgcgcgcggagaagggctac
atcatcgtcggccaggataccgacggctcgatcacgccgtacgacctcggaatgggcggg
ctggtcgcgaagtcgaaggacttcctcggcaagcgttcgctcacgcgctcggataccgcg
aaggaaggccgcaagcagttcgtcggtctgctgaccgaagacgaacagttcgtgctgccg
gaaggcgcgcagatcgtcgcgaaggacacgcaggtgtcggcggtcgatccgacgccgatg
atcggccacgtgacgtcgagctactacagcccgatcctgaagcgctcgatcgcgctcgcg
gtggtgaagggcggcctgaacaagatgggcgagagcgtcgtgattccgctggccgacggc
aagcgcatcaccgcgaagatctcgagcccggttttctacgataccgaaggggtgcgccag
catgtggaatga
DBGET
integrated database retrieval system