Brevundimonas mediterranea: GYM46_01010
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Entry
GYM46_01010 CDS
T06564
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
bmed
Brevundimonas mediterranea
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmed02000
]
GYM46_01010
Transporters [BR:
bmed02000
]
Other transporters
Pores ion channels [TC:
1
]
GYM46_01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF5315
Motif
Other DBs
NCBI-ProteinID:
QIH71685
UniProt:
A0AB37E489
LinkDB
All DBs
Position
complement(192256..195039)
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AA seq
927 aa
AA seq
DB search
MSKQYPVRGMGPNLKKVLLATVSAAVAGASASAAFAQEAATAEVDEIVVTGFRKSLSDAR
AIKQDSVIQVDAIVAEDMAKFPDLNLAESLQRLPGVQINREAGEGRRISLRGLGPDFARV
QLNGMEVLGNVDSAQDSRGQRSRDRAFDFNIFASELFSRVEVEKTFEAAQKEGGMAGTVG
LFTGKPFDYGTGADGALSLKVGTNEYTEDTQPRIAALFTQNWDNVFGVSFSAAYSKRETT
EQGHNTYNRSNPSAATMQSLVTKGLNISGLSAAQRAKFLSGDLYFADGNRISSWNAEQER
LGLTAAVQWRPMDGMELTLDVLHGEFTTRRNEYHLATRPLASTGSVAFDTAAGGVWPSIF
QSASVINDLTWDSDNYVTMTDVTGATFGSEHRRSLNENKFNQVALTGEWEMSDRLKFDGH
VGWEKSTYDTPYDDKLYMRAKGNLIANYGENGQSASFEYPNWDPTNPANYAMDSFYYRAF
NNESELHEGELNARYELNDTWTLRAGVAYHKFRQQGEDLFYDDNVNGTRSKMRGTAVGDV
TSVFTNAFGSWLVGDYDKAFAKYNEYHRLEQNKDGTGGALQDIENVYETTEETLSGFVQG
DWDSELFGRRFRGNIGLRGYSTDTHSTGWIQGDNYAYLGTTDVEGSYEGVLPAMNAVLEV
TPEVLVRFSATQNLNRPGLGSMAAEGSAFQDSSGKITASRGNPNLEPYKDNTLDFAVEYY
FGDVGLMSASLFHKDIKNFIETVRFTDVPFSETGVPYSTIPGATASTIVNEFSMPVNKEG
RVELTGLELAAQSQLSFLPAPFDNLGVVANYTYIDMPDDLTGISKTSYNATVYYETDRWG
ARASLNYRDKWYTGYNTAVMSASTRGFEGGTYVDAAAFFNITESLQLTFDAVNLTNEKDT
QFWGQNEYLYNQNQSGTTYTAGLTYKF
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcaatatcccgttcggggcatgggcccgaacctcaagaaggtgctgttggcg
acggtgtcggcggcggtcgccggcgccagcgcatccgcagccttcgcccaggaggcggcg
accgccgaggtcgacgagatcgtcgtcaccggcttccgcaagtcgctgagcgacgcgcgg
gcgatcaagcaggattcggtcatccaggtcgacgccattgtggccgaggacatggccaag
ttcccggatctcaatctggcggaatcgctgcagcgcctgcccggcgtgcagatcaaccgt
gaggccggcgagggccgtcggatctcgctgcggggcctcggtccggacttcgcccgggtg
cagctgaacggcatggaagtgctgggcaacgtcgactcggcgcaagacagccgcggccag
cggtcgcgtgaccgcgcgttcgatttcaatatcttcgcttcggaactgttctcgcgggtc
gaggtcgagaagacctttgaagccgcgcagaaagagggcggcatggccggcaccgtcggc
ctgttcaccggcaagccctttgactacggcacaggcgccgacggcgccctgtcgctgaag
gtcggcaccaacgaatataccgaagacacccagccgcgcatcgccgccctgttcacccag
aactgggacaatgtgttcggcgtctccttctcggccgcctacagcaaacgcgagacgacg
gagcagggccacaacacgtataaccgttccaaccccagcgccgcgacgatgcagagcctc
gtgaccaagggattgaacatctccggcctgtccgccgcccaacgggccaagttcctgtcc
ggagatctgtatttcgccgacggcaatcgtatctcgtcgtggaacgccgagcaggaacgg
ctgggcctgacggcggcggtccagtggcgtccgatggatggcatggaactgacgctcgat
gtgctgcacggcgagttcacgacgcgccgtaacgagtatcatctggcgacgcggcctctg
gcctcgaccggttcggtggccttcgacacggccgccggcggcgtctggccgtcgatcttc
cagtcggcctcggtcatcaacgacctgacctgggacagcgacaactacgtgaccatgacc
gacgtcacgggcgccaccttcggcagcgagcatcgccggtcgctgaacgagaacaagttc
aatcaggtcgcgctgaccggtgaatgggaaatgtccgaccgtctgaagttcgacggtcac
gtgggttgggaaaagtcgacctatgacacgccgtatgacgacaagctgtacatgcgcgcc
aagggcaatctgatcgccaactatggcgagaacggccagtccgcctcgttcgaatatccg
aactgggacccgaccaatccggccaactatgcgatggattcgttctactaccgcgccttc
aacaatgaatcagagctgcacgagggcgagcttaacgcgcggtacgaactgaacgacacc
tggacgctgcgcgccggcgtcgcctatcacaagttccgccagcagggcgaagacctgttc
tatgacgacaatgtcaacggcacgcggtccaagatgcgcggcacggcggtcggcgacgtc
acctcggtcttcaccaacgccttcggatcgtggctggtcggcgactatgacaaggccttc
gccaagtacaacgagtaccaccgtctggagcagaacaaggacggcaccggcggcgccttg
caggacatcgagaacgtctatgagacgaccgaggaaaccctgtccggcttcgttcagggc
gactgggacagcgaactgttcggccgccgcttccgcggcaatatcggcctgcgcggctac
agcaccgacacccacagcaccggctggatccagggcgacaactatgcctatctgggcacg
accgacgtggaaggcagctacgagggcgtgttgccggccatgaacgcggtcctggaagtg
acgccggaggtgctggtgcgcttctccgcgacccagaacctgaaccgtccgggcctcggc
tcgatggcggccgagggcagcgccttccaggacagctcgggcaagattactgcttcgcgc
ggtaatccaaatctggagccctacaaggacaacaccctggacttcgccgtcgaatactac
ttcggcgacgtcggcctgatgtcggctagcttgttccataaggacatcaagaacttcatc
gagacggtgaggtttactgacgtgccattcagcgaaacgggggtgccttacagcaccatc
cccggcgcgaccgcgagcactatcgtcaatgagttctcgatgccggtgaacaaggaaggc
cgggtggaactgacaggcctggaactggcggcgcagagccaactgtcgttcctgcctgcg
ccgttcgacaatctgggtgttgtggcgaactacacctacatcgacatgccggacgatctg
acggggatttccaagacaagctacaacgccacggtctattacgagaccgaccgttggggt
gcgcgcgcctcgctgaactatcgcgacaagtggtacaccggctacaatactgccgtcatg
agcgccagcacgcgcgggttcgaaggcggcacctatgtcgacgccgcagccttcttcaac
atcaccgagtcgttgcagctgacgttcgacgcggtcaacctgacgaacgaaaaggacacc
cagttctggggtcagaacgagtatctgtacaatcagaaccagagcggaacgacctatacg
gccggcctgacctacaagttctga
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