Brevundimonas mediterranea: GYM46_01750
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Entry
GYM46_01750 CDS
T06564
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GYM46_01750 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmed03400
]
GYM46_01750 (uvrA)
DNA repair and recombination proteins [BR:
bmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYM46_01750 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GYM46_01750 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
DnaJ_CXXCXGXG
AAA_21
BCA_ABC_TP_C
ATPase
DUF4350
AAA_33
nSTAND1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QIH71811
UniProt:
A0AB37E2Y0
LinkDB
All DBs
Position
356876..359821
Genome browser
AA seq
981 aa
AA seq
DB search
MTEKHNFIRVRGAREHNLKGVDLDIPREQLVVMTGLSGSGKSSLAFDTIYAEGQRRYVES
LSAYARQFLELMGKPDVDLIEGLSPAISIEQKTTSKNPRSTVGTVTEIHDYMRLLWARVG
VPYSPATGLPIESQTISQMVDKLVALPDGERILLLAPVVRGRKGEYKKEIAEWQRQGFQR
LKIDGQFYPIDEAPTLDKKFKHDIDIVVDRIVTKPDQEARYADSLQTALGLADGIANAEW
ASTAEGETAPRSLLFSERFACPVSGFTISEIEPRLFSFNNPFGACPVCDGLGVKLAFDAD
LVIPDRDKTLHKGAVAPWARGPSPLYTQTLQSLSRHYGFSMDVAWRELPAQAHKAILYGT
GAEKIKFTYDDNARKYEVSKPFEGVLPNLERRWRETDSAWVREELARYQSETPCDACHGK
RLKPEALAVKVGGQDIADVSTLSIKKAYDWVQALPEALSDKQMEIGRRILKEIGDRLRFL
NNVGLDYLSLSRASGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNTRLLES
LKGLRDLGNSVLVVEHDEEAILTADYVIDMGPAAGVHGGEVCAEGTPAQVMANPKSLTGK
YLTGEREIEIPADGRRPIDRKRMLKISGASGNNLKSVTGEIPVGVFTCITGVSGGGKSTF
TIETLYKAAARRLNNASEAPAPFDRIEGLEHFDKVIDIDQSPIGRTPRSNPATYTGAFGP
IRDWYAGLPESKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKR
YNRETLEIVFKGKSISDVLDMTVEEAATFFKAVPPIRDKMLTLERVGLGYVKVGQPATTL
SGGEAQRVKLSKELSKRATGRTLYILDEPTTGLHFEDTRKLLEVLQELVEAGNTIVVIEH
NLDVIKVADYLLDFGPEGGDGGGEIVAVGTPEQVADNAASWTGKYLKEVLDRHETRRKAR
VATLGGSVGEPVKKKRVKASA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaagcacaacttcatccgcgttcgcggcgcccgcgagcataatctcaagggc
gtggacctcgatatcccgcgcgaacagctggtggtgatgaccggcctgtcgggctcgggc
aagtcgtccctggcgttcgacaccatctacgccgagggccagcgtcgctatgtcgagagc
ctgtcggcctatgcccgtcagttcctggagctgatgggcaagccggacgtggacctgatc
gagggcctgtcgccggccatctccatcgaacagaagacgacgtccaagaacccacgctcg
accgtcggcacggtgaccgagatccacgactatatgcgcctgctgtgggcgcgggtgggc
gtgccctattcgcccgccaccggccttccgatcgagagccagaccatcagccagatggtc
gacaagctggtcgccctgccggatggcgaacgcatcctgctgctggcccccgtcgttcgg
ggcaggaagggcgagtacaagaaggaaatcgccgaatggcagcgccagggcttccagcgg
ctgaagatcgacgggcaattctatccgatcgacgaagccccgaccctggacaagaagttc
aagcacgacatcgacatcgtcgtggaccggatcgtcaccaagcctgaccaggaagcccgc
tacgccgacagtcttcagaccgccctgggtctggccgacggcatcgccaatgccgaatgg
gccagcacggccgagggcgagacggcgccgcgcagcctgctgttctccgaacggttcgcc
tgtccggtgtcaggcttcaccatctctgagatcgagccgcggctgttctcgttcaacaac
cccttcggcgcttgcccggtctgcgacggcctgggggtcaaactggccttcgacgccgac
ctggtgatcccggaccgcgacaagacactgcacaagggcgcggtcgccccttgggcgcgc
ggtccctcgcccctctacacccagacgcttcagtcgctcagccgccactacggcttctcg
atggacgtggcctggcgcgagcttccggcccaggcccacaaggcgatcctttatggaacc
ggcgccgagaagatcaagttcacctatgacgacaacgcccgcaaatatgaggtctccaag
ccgttcgagggcgtgctgccgaacctggagcgtcgctggcgcgagaccgacagcgcctgg
gtgcgcgaggaactggcccgttatcagtccgaaacgccctgcgacgcctgccacggcaaa
cggctgaagcccgaggccctggcggtcaaggtcgggggccaggacatcgccgacgtctcc
accctgtcgatcaagaaggcctacgactgggtccaggccctgcccgaggcgctcagcgat
aagcagatggagatcggccggcgcatcctgaaggagatcggcgaccggctgcggttcctg
aacaacgtcggcctcgactatctgtcactgtcgcgcgcctccggcaccctgtcgggcggc
gagagccagcgcatccgtctggcgtcgcagatcggctccggcctgaccggcgtcctctat
gttctggacgaaccctccatcggcctgcaccagcgcgacaacacccgcctgctggaaagc
ctgaagggactgcgcgacctgggcaattcggtcctggtggtcgagcatgacgaggaagcc
attctgaccgccgactatgtcatcgacatgggcccggccgccggcgtccacggcggcgag
gtctgcgccgagggcacgccggcccaggtcatggccaatccgaaatcgctgacgggcaaa
tacctgaccggcgaacgcgagatcgaaatccccgccgacggccgacggccgatcgaccgc
aagcggatgctgaagatcagcggcgccagcggcaataatctgaagagcgtcacgggtgaa
atccccgtcggcgtcttcacctgcatcaccggcgtgtccggcggcggcaagtccaccttc
accatcgagaccctgtacaaggccgccgcgcgccgcctgaacaatgcgtcggaagccccc
gcccccttcgaccggatcgaggggctggagcatttcgacaaggtcatcgacatcgaccag
tcgcccatcggccgcaccccgcgctcgaacccggccacctacaccggcgccttcggcccg
atccgcgactggtacgccggcctgccggaatcaaaggcgcgcggctacggccccggccgg
ttcagcttcaacgtcaagggcggccgctgcgaggcctgccagggcgacggcgtcatcaag
atcgagatgcacttcctgcccgacgtctatgtcacctgcgacgtctgcaagggcaaacgc
tacaatcgcgagacgctggagatcgtgttcaagggcaagtccatctcggacgtgctggac
atgacggtcgaggaggccgcgaccttcttcaaggccgtgccgccgatccgcgacaagatg
ctgacgctggaacgggtgggcctgggctacgtcaaggtcggccagccggcgaccaccctg
tcgggtggcgaggcccagcgggtcaagctgtccaaggaactgtcgaaacgggccacgggc
cgcaccctctacatcctcgacgagccgaccaccggcctgcacttcgaggatacgagaaag
ctgctggaagtgctgcaggaactggtcgaggccggcaacaccatcgtggtgatcgagcac
aatctggatgtcatcaaggtcgccgactacctgctcgacttcggccccgaaggcggcgac
ggcggcggcgagatcgtcgcggtcggcacgccggaacaggtggcggacaacgccgccagc
tggaccggcaaatacctcaaggaggtgctggaccggcacgagacccgccgcaaggcgcgg
gtcgcgacgcttggtgggtcggtgggtgaacctgtgaagaagaagcgggtgaaggcgtcg
gcctga
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