Brevundimonas mediterranea: GYM46_02340
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Entry
GYM46_02340 CDS
T06564
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
bmed
Brevundimonas mediterranea
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmed03009
]
GYM46_02340
Enzymes [BR:
bmed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GYM46_02340
Ribosome biogenesis [BR:
bmed03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GYM46_02340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
Methyltransf_25
FtsJ
Methyltransf_15
GCD14
Motif
Other DBs
NCBI-ProteinID:
QIH71909
LinkDB
All DBs
Position
complement(473036..474337)
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AA seq
433 aa
AA seq
DB search
MTPAARLAAAAAVLDSIAQGNQPAETVLKAWGTANRYAGSKDRRAIADHVYKVLRARGRL
SWIMGGREDGRALVIGSLHAIDGLSVEEIEALHSGDGYGPRPLSKQERSRITAGQGKLPG
WVAAGLPEFVVEDFKATFGDRWAEEAHALMAPRAPIDLRVNDAAATVDAVEVELRNAGLS
VARTPWSALGLRVPSEPPPNIQALDGFKAGKFEIQDEGSQVVCWLAGAQPGATVVDYCAG
GGGKTLGLAQAMGGQGKLIASDVVNKRLENIRPRLQRAGVEAELVLIGQNGGGLEAVNGR
ADLVFVDAPCSGSGTWRRRPEDAWRLTAEEVEKLHALQVRILSQATKLVKPGGRLVYVTC
SMLARENEASADAFEAANPDFHPVAVADVLSAPQLTEAARARFAELASGARLRLSPASAD
TDGFFAAVYQRAA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgaccccagccgcccgtctcgccgccgccgccgccgtcctggactccatcgcccagggc
aaccaaccggcggaaaccgtcctgaaggcctgggggaccgccaaccgctacgccgggtcc
aaggatcggcgggccatcgccgatcatgtctacaaggtgctgcgggcgcgcggccgcctg
tcgtggatcatgggcgggcgcgaggacggccgggccctggtgatcggttcgctgcacgcc
atcgacggcctgtcggtggaagagatcgaggcgctgcactcgggcgacggctatggcccg
cgaccgctgtcgaaacaggagcgcagccggatcacggcggggcaggggaaactgccgggc
tgggtcgcggccggtctgcccgagttcgtggtcgaggatttcaaggccaccttcggcgac
cgctgggccgaagaggcccacgccctgatggccccccgcgcgcccatcgacctgcgcgtc
aatgacgcggcggccacggtggatgcggtcgaggtcgagttgcgtaacgccggtctgtcg
gtcgcccgcacgccctggtccgccctggggctgcgcgtgccgtccgagccgccgcccaat
atccaggccctggacgggttcaaggccggcaagttcgagatccaggacgagggcagccag
gtcgtctgctggctggccggcgcgcaacccggcgcgacggtggtggactattgcgccggc
ggcggcggcaagaccctgggtctggcccaggccatgggggggcagggcaagttgatcgcc
tccgacgtcgtcaacaagcggctcgagaacatccgcccccgcctgcaacgcgcgggcgtc
gaggccgagctggtgctgatcggccagaacggcggcgggctggaagccgtcaacggccgg
gccgatctggtcttcgtcgacgccccctgttcgggatccggcacctggcggcgtcgaccc
gaggacgcctggcgtctgacggccgaagaggtcgagaaactgcacgcgcttcaggtccgc
atcctgagccaggcgaccaagctggtgaagccgggcgggcgtctggtctatgtcacctgt
tcgatgctggcccgcgagaacgaggccagcgccgacgccttcgaggccgccaatccggac
ttccacccggtcgccgtcgccgacgtcctgtcggcgccccaactgaccgaggccgcgcgg
gccaggttcgctgaactggcgtccggcgcgcgtctgcgactgtcgccggcctcggccgac
accgacggcttcttcgccgccgtctatcagcgcgccgcctga
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