Brevundimonas mediterranea: GYM46_03965
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Entry
GYM46_03965 CDS
T06564
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bmed
Brevundimonas mediterranea
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmed03021
]
GYM46_03965 (rpoH)
Transcription machinery [BR:
bmed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GYM46_03965 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
HTH_3
HTH_11
HTH_19
GntR
Sigma70_r4_2
NirdL-like_HTH
DUF3431
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
QIH72193
UniProt:
A0A6G7EF53
LinkDB
All DBs
Position
804382..805269
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AA seq
295 aa
AA seq
DB search
MAANSTLAVMSPEQGLSRYLTEIRKFPMLTKDEEFMLAKRWSEHQDPEAAHRLVTSHLRL
VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFDPDKGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTAAQKKLFFNLRKAKSQISAFEEGDLHPEHLAAIATKLGVSEEEVTNMNRRL
GGDASLNAPLRADGESEWQDWLADDTAVSQETQLADDEEKGIRMSLLQEAMEELTDREKH
ILTERRLKDDPVTLEELAGQYGVSRERVRQIEVRAFEKLQKAMRAAAEERNLVDA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaatagtacgctcgcggtgatgtcgcctgaacaaggcctgtcgcgttatctg
acggaaatccgcaaattcccgatgctgaccaaggacgaggagttcatgctcgccaagcgt
tggtcggaacaccaggatcccgaagccgcccaccgtctcgtgacctcgcaccttcgtctc
gtggccaagatcgccatggggtatcgcggctacggcctgccgatcggcgaagtgatttcc
gagggcaatgtcggcctgatgcaggccgtcaagaaattcgacccggacaagggcttccgc
ctggccacctacgccatgtggtggatccgcgcctcgatccaggaatacatcctgcgcagc
tggtcgctggtgaagatgggcaccaccgccgcccagaagaagctgttcttcaacctgcgc
aaggccaagagccagatctcggccttcgaggaaggcgacctgcaccccgaacacctcgcc
gccatcgccaccaaactgggcgtcagcgaggaagaggtcaccaatatgaaccgccgtctc
ggcggcgacgcctcgctgaatgcgccgctgcgcgccgacggcgaaagcgaatggcaggac
tggctggcggacgacacggccgtctcccaggagacccagctggccgacgacgaggaaaag
ggcatccgcatgagcctcctgcaagaggccatggaagagctgacggaccgcgagaaacac
attctgacggaacgccgcctcaaggacgatcccgtcactctggaagaactggccggccag
tacggcgtctcgcgcgagcgcgtccgtcagatcgaggtccgcgctttcgagaagctgcag
aaagccatgcgcgccgccgccgaggaacggaacctggtcgacgcctga
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