Brevundimonas mediterranea: GYM46_05605
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Entry
GYM46_05605 CDS
T06564
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GYM46_05605
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bmed01007
]
GYM46_05605
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmed03016
]
GYM46_05605
Enzymes [BR:
bmed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
GYM46_05605
Amino acid related enzymes [BR:
bmed01007
]
Aminoacyl-tRNA synthetase
Class II (U)
GYM46_05605
Transfer RNA biogenesis [BR:
bmed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GYM46_05605
Prokaryotic type
GYM46_05605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
DUF7252
Motif
Other DBs
NCBI-ProteinID:
QIH72469
UniProt:
A0AB37E5F6
LinkDB
All DBs
Position
complement(1139695..1142133)
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AA seq
812 aa
AA seq
DB search
MKFTLSWLKDHLETEADVHQIAEAMTMAGLEVEEVLDPAAKLAPFTVARILSAERHPNAD
RLQVCQVETVDGVKEIVCGAPNARAGLTTIYAPIGAYVPGLGVTLVEKPVRGVVSNGMLC
SASELELADESDGIQELPLEIPVGTPVAGLFGAEPVIDFEVTPNRPDWLGVAGIARDLAA
ASVGKLKHFDIAVVRGAFPSPITVRLDAPEMCPVFAGRVIRGVKNGPSPAWLQKRLTAIG
LRSINRLVDVTNLIAYDRARPLHVYDVAKLVGTEIVVRGGQVSAETAHIEGGEPEHLIAL
DGKTYTAAATDCVIADAGGERPIGLGGVMGGESTGCDETTTDVFIESAWFDPLVIAQTGR
ALGIHSDAQYRFARGVDPVSVTPGLELATRLILDLCGGEPSEIVFVGDPPASPAPFAFDP
AYVKRLTGMDLDDDRIGTILGQLGFLITAAPAGQAEPWIVTPPSWRRDVEGRADLVEEVA
RIEGFDSLPDTPLPEVARPAGGVLSPRQARVRTARRALAALGYAEAVTWSFTKQSTAALF
GGGDDRLVLENPIAADLDCMRPSALPNLIQAAARNAARGFADAALFEIGPVYLGDGPKDQ
RTVIAALVAPHAARHWAGAGEDALFALKADLTTLLEEIGAPVASLQLAQGQNRDWWHPGR
SARLQLGPKNVMVEFGELHPRVLKALDADGPMLGFEIVLDAVPEPRGKSGKARGSADLSA
FMPLTRDFAFVVEDAKPVGDLVRAAAGADKALIAEVRVFDVYRGKGVDDGFKSVALEVVI
QPREATLAEAEIEVLTAKIVAAVEKQGGRLRA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccctctcctggttgaaagaccacctcgaaaccgaggctgacgtccatcag
atcgccgaggccatgaccatggccgggctggaggtcgaggaggttctcgaccccgccgcc
aaactggcgcccttcaccgtggccaggatcctgtcggccgagcgtcacccgaacgccgac
cggctgcaggtctgccaggtcgaaaccgtcgatggcgtgaaagagatcgtctgcggcgcg
ccgaacgcgcgggcgggcctgaccaccatctacgcccccatcggcgcctatgtgcccggc
ctgggcgtgaccctggtcgagaagccggtgcgcggcgtggtgtccaacggcatgctgtgt
tcggcctcggagctggagctggccgatgagagcgacggcatccaggagctgccgctggaa
atcccggtcgggacgccggtcgccggcctgttcggcgcggaacccgtgatcgatttcgaa
gtcacgccgaaccggcccgactggctgggcgtcgccggtatcgcgcgggatctcgccgcc
gccagcgtcggcaagctgaagcatttcgacatcgccgtggtgcgcggggccttcccgtcg
ccgatcaccgtgcggctggacgcgcccgagatgtgcccggtcttcgccggccgggtgatc
cggggcgtcaagaacgggccgtcgccggcctggctgcagaaacgcctgacggccatcggc
ctgcgttcgatcaaccggctggtcgatgtgaccaatctgatcgcctatgaccgcgcccgc
ccgctgcacgtctatgacgtggccaagctggtcgggaccgagatcgtggtgcgcggcggc
caggtctcggccgagacggctcatatcgagggcggcgagcccgaacatctgatcgccctg
gacggcaagacctatacggccgccgcgaccgactgcgtcatcgccgacgccgggggcgag
cgccccatcggcctgggcggggtcatgggcggcgaaagcaccggctgcgacgaaaccacg
accgatgtcttcattgaaagcgcctggttcgacccgctggtcatcgcccagacgggtcgt
gcgctgggcatccattccgacgcccagtaccggttcgcgcgcggcgtcgatccggtctcg
gtcacgcccggcttggagctggccacccgcctgatcctggacctgtgcggcggcgagccg
tccgagatcgtcttcgtcggcgaccccccggccagcccggcgcccttcgccttcgacccc
gcctatgtgaagcgtctgacgggcatggacctggacgacgaccggatcgggaccatcctg
ggccagctcggcttcctgatcacggccgcgccggccggtcaggccgaaccctggatcgtg
accccgccgtcgtggcggcgcgacgtcgagggccgggccgatctggtcgaagaagtcgcg
cggatcgagggtttcgacagcctgcccgacacgcccctgcccgaggtcgcccgtcccgcc
ggcggggtgctgagcccgcgtcaggcccgcgtccgcacggcgcgccgggccctggcggcc
ctgggctatgccgaggccgtcacctggtccttcaccaagcaatcgaccgcggccctgttc
ggcgggggagacgaccggctggtgctggagaaccccatcgcggccgatctggactgtatg
cgcccctcggccctgccgaacctgatccaggcggcggcgcgcaacgccgcgcgcggcttc
gccgacgcggccctgttcgagatcggccccgtctatctgggcgacggccccaaggatcag
cgcacggtcatcgccgccctggtcgccccccacgccgcccgccactgggccggcgccgga
gaggacgccctgttcgccctgaaggccgatctgaccaccctgctggaagagatcggcgcc
ccggtcgcctcgctgcaactggcccagggtcagaaccgcgactggtggcaccccggccgt
tcggcccggctgcagctggggccgaagaatgtgatggtcgagttcggcgaactgcatccg
cgcgtgctgaaggcgctggacgccgacggcccgatgctgggctttgagatcgtgctggac
gccgtgcccgagccgcgcggcaagtcgggcaaggcgcgaggatcggcggacctgtcggcc
ttcatgcccctgacccgcgacttcgccttcgtggtcgaggacgccaagccggtcggcgat
ctggtccgggctgcggccggcgccgacaaggccctgatcgccgaggtccgggtgttcgac
gtctatcgcggcaagggcgtggacgacggcttcaagtccgtcgccttggaagtcgtgatc
cagccgcgcgaggcgaccctggcagaggccgagatcgaagtcctgaccgccaagatcgtg
gcggcggtggagaagcagggcggcaggctgcgggcgtag
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