Brevundimonas mediterranea: GYM46_07090
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Entry
GYM46_07090 CDS
T06564
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bmed
Brevundimonas mediterranea
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmed03016
]
GYM46_07090 (truB)
Enzymes [BR:
bmed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GYM46_07090 (truB)
Transfer RNA biogenesis [BR:
bmed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GYM46_07090 (truB)
Prokaryotic type
GYM46_07090 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QIH72735
UniProt:
A0AB37E6W0
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All DBs
Position
1453015..1453944
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AA seq
309 aa
AA seq
DB search
MARKKKGDVVDGWVCLDKPFEMGSTEAVSRIRRLFNAQKAGHAGTLDPLASGILPIALGE
ATKTVPMMMEAQKVYRFTINWGVSTDSVDREGEIIGRSDVRPSVEAVKAALPAFVGEIDQ
TPPRFSAIKVDGARAYDLARDGVEFELQSRRVTIHSAEVTDAPDADHVELTIRTGKGVYV
RSLARDLALALGAEGHVSALRRERVGPFSTENAVTLDSLEEMVHRGAASEGLLPVATALD
GIPELAVTDQDAFSLRQGRPIVLLPRQVETLKDRLSGGSRTVSAFQGQTLVALCQLRAGR
LEPDRVFNL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaagaagaagggcgacgtcgtcgacggctgggtgtgcctggacaagccgttc
gagatgggatcgaccgaggcggtcagccgcatccgccgcctgttcaacgcccagaaggcc
ggtcacgccgggacgctggatccgctggccagcggcatcctgcccatagcgcttggcgag
gcgaccaagaccgtgccgatgatgatggaggcgcagaaggtctatcgtttcaccatcaac
tggggcgtatcgaccgacagcgtggaccgcgaaggcgagatcatcggccggtccgacgtc
cgcccctcggtcgaggcggtgaaggccgccctgcccgccttcgtcggcgagatcgaccag
accccgccccgtttctcagccatcaaggtggacggcgcccgcgcctatgacctggcccgc
gacggtgtcgagttcgagcttcagtcccgccgcgtcaccatccattcggccgaggtcacc
gacgccccggacgccgaccatgtcgaactgaccatccgcaccggcaagggcgtttacgtg
cgctcgctggcgcgcgacctggcgctcgccctgggcgccgagggtcacgtaagcgccctg
cgccgcgagcgggtcggcccgttcagcacggaaaacgccgtcactctggattctctggaa
gaaatggtgcataggggcgccgcctcggaaggcttgcttcccgttgcgaccgccctggac
ggcatcccggagctggccgtgacggatcaggacgccttctcgcttcggcagggacgcccg
atcgttctgctcccccgtcaggtggaaaccctcaaggatcgcctttccggcggttcgcga
acggtttcagcctttcagggccagaccctcgtcgcactctgccagttgcgggccggccgg
ttagaacccgaccgcgttttcaacctctag
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