Brevundimonas mediterranea: GYM46_07100
Help
Entry
GYM46_07100 CDS
T06564
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GYM46_07100 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmed03019
]
GYM46_07100 (pnp)
03016 Transfer RNA biogenesis [BR:
bmed03016
]
GYM46_07100 (pnp)
Enzymes [BR:
bmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GYM46_07100 (pnp)
Messenger RNA biogenesis [BR:
bmed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GYM46_07100 (pnp)
Transfer RNA biogenesis [BR:
bmed03016
]
Prokaryotic type
tRNA degradation factors
GYM46_07100 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
GYD
Motif
Other DBs
NCBI-ProteinID:
QIH72737
UniProt:
A0A6G7EHA3
LinkDB
All DBs
Position
1454540..1456777
Genome browser
AA seq
745 aa
AA seq
DB search
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRSPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNETQVVITVLQH
DMENDPDVLGMVAASAALTISGVPFMGPIGAARVGLIDGELVLNPTVDQIPGSDLDLVVA
GTQDALMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIDLAEHAAKEPFDFQAEDHSD
VVTSIKKLVGEDIKAAYTHPGKYDRRSGVDAAKKTAAAALVKTDENPEGVDSSKFAAAFK
ECEADVLRRDIIENAHRVDGRALDKVRAIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYIDSLQGTYKESFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPSK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLIRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMKQALTQASAGRLHILDEM
SKAMDAPRAELGEHAPKIETIKIAVDKIREVIGSGGKVIREIVEKTGAKIDIGDDGTIKV
AANDQEKIDAAKAWIQSIASEPEVGTIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQTTGEDLTDKINAERAERGEEPLS
DDTGGRPKREGGGDRGGDRGRRRRD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgagtgggccggacgcccgctgaccctggaaacg
ggccgcatcgcccgccaggccgacggcgccgtgctggcgacctacggcgagaccgtggtt
ctggccaccgtcgtctatggccgttcgcccaagccgggtctggatttcttccccctgacc
gtcaactaccaggaaaagaccttcgccgccggcaagatcccgggcggctatttcaagcgt
gaaggccgtcccagcgaaaaggaaaccctggtttcccgcctgatcgaccgtccgatccgc
cccctgttcgtcaagggcttcaagaacgagactcaggtcgtcatcaccgtgctgcagcac
gacatggaaaacgatccggacgtgctgggcatggtcgccgcctcggccgccctgaccatc
tcgggcgtgcccttcatgggccccatcggcgccgcgcgcgtcggcctgatcgacggcgag
ctggttctgaacccgacggtcgaccagatcccgggctctgacctggacctggtggtcgcc
ggcacgcaagacgccctgatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggcgctgatgttcgcccacgccggcatgcagccggtgatcgacgccatcatc
gatctggccgaacacgccgccaaggagcccttcgacttccaggccgaagaccactccgac
gtcgtcacctcgatcaagaagctggtcggcgaggacatcaaggccgcctacacccacccc
ggcaagtacgaccgtcgctcgggcgtcgatgcggccaagaagaccgccgccgccgccctg
gtgaagaccgacgaaaaccccgaaggcgtcgacagctccaagttcgcggccgccttcaag
gaatgcgaagccgacgtcctgcgtcgcgacatcatcgagaacgcccaccgcgtcgacggc
cgcgccctcgacaaggtccgcgccatcgtgtcggaagtcggcgttctgccgcgcacccac
ggttcggccctgttcacgcgtggggaaacccaggccctggtcgtcgccaccctcggcacc
ggcgaggacgagcagtacatcgacagcctgcagggcacctacaaggaaagcttcctgctg
cactacaacttccccccctattcggtgggtgaagcgggccgcatgggttcgcccggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgcgatccgtccgatgctgccgtcgaag
gaagacttcccctacaccatccgcctggtctccgagatcaccgagtcgaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctggccctgatggacgccggcgtgccgctgatc
cgtccggtctcgggcatcgccatgggcctgatcctggagccgtcgggcgaattcgccatc
ctgtcggacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtcgccggc
acctcggaaggcatcaccagccttcagatggacatcaaggtcgccgggatcaccaaggag
atcatgaaacaggccctgacccaggcctcggccggtcgcctccacatcctggacgagatg
tccaaggccatggatgcgccgcgcgccgaactgggcgagcatgcgccgaagatcgaaacc
atcaagatcgcggtcgacaagatccgtgaagtgatcggttcgggcggcaaggtgatccgc
gagatcgtcgagaagaccggcgccaagatcgacatcggcgacgacggcaccatcaaggtc
gccgccaacgaccaggaaaagatcgacgccgccaaggcctggatccagtccatcgcctcg
gaaccggaagtcggaaccatctactccggcaaggtcgtcaaggtcgtcgatttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgccctggaa
cgcgtcgccaacccggccgacgtcctgtcggaaggccaggaggtcaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcagaccacgggt
gaagacctaaccgacaagatcaacgccgaacgcgccgagcgcggcgaagagcccctgtcg
gacgacaccggcggccgtcccaagcgcgaaggcggcggtgatcgcggcggcgaccgcggt
cgtcgtcgtcgcgactag
DBGET
integrated database retrieval system
