Brevundimonas mediterranea: GYM46_08280
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Entry
GYM46_08280 CDS
T06564
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYM46_08280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmed03400
]
GYM46_08280
Enzymes [BR:
bmed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYM46_08280
DNA repair and recombination proteins [BR:
bmed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYM46_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
Helicase_C
ResIII
DUF6011
ADDB_N
Zn_ribbon_PriA
Motif
Other DBs
NCBI-ProteinID:
QIH72948
UniProt:
A0AB37E7B5
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All DBs
Position
1699192..1701354
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AA seq
720 aa
AA seq
DB search
MKVASVLIPLPVPEAFDYEAPEGMTLARGDQVAVPLGPRLIRGVVAEVFETTGSNRRLKS
VESRLDDPALPAGVMDFVEWAGRWTLSPPGEMAATALKGLRAPRPKPERRVRRVGDRQPA
RATPARTGVLEALGERAMAGADLARAAGVSSGLVKGLIDEGVLEIIEIAAEAAFERPDPD
HAPATLNGDQAAAASALAAGVTGGGFRPFLLDGVTGSGKTEAYLEAIARVLRSDPAAQIL
ILLPEIALTQALIERITARFGAAPAEWHSGVAPPRRRQVWEAVVAGRCNIVVGARSALFL
PFVDLRLIVVDEEHDSSFKQEEGLVYHGRDLAVARARIEGAAVVLASATPSLETLWNAQA
GRYDWLKLGARHGVAVMPDIELLDLRQHTPDPQTWLSQPLRTAVAETLARGEQTLLFLNR
RGYAPVVLCRVCGHRLTAPDTDSWLVEHRYTGRLVCHLTGFSMARPKLCPSCGAEDSLVS
VGPGVERVEEEVRQLFPEARTAVFSSDTAPDAKSARALIQRMTDGEIDILVATQAAAKGH
NFPRLTLVGVVDADLGLRGGDLRAAERTYQLLAQATGRAGRADRPGRAILQTWTPEHPVL
MALAAGDRDAFVEAEMAEREAAALPPFGRLAAIILSSENAAAVEKVAADLAQAIPNAERL
EVYGPADAPLALVRGRRRKRLLVRADRDVNLQAFLRAWLARVKVPASVRLTVDVDPYSFL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtcgcctcggtcctcattcccctgcccgtgccggaagccttcgattacgaggcg
cccgaaggcatgacgctggcgcgcggcgatcaggtggcagtgcccctggggccgcgtctg
atccgaggcgtggtggccgaggtgttcgagaccaccggctccaaccggcggctgaaatcg
gtcgagtcgagactggacgaccctgcgctaccggccggggtgatggacttcgtcgaatgg
gccgggcgctggaccctgtcgccgcccggcgagatggcggcgaccgcactgaaggggctg
cgcgcgccacgccccaagccggaacgccgcgtgcggcgggtcggcgaccgccagccggcg
cgcgccaccccggcccggacgggggtgctggaagcccttggcgagcgcgccatggcgggc
gccgatctggcgcgcgccgccggcgtgtcgtccggcctggtcaagggcctgatcgacgag
ggggtgctggagatcatcgaaatcgcggccgaggcggcgttcgaacggcccgatcccgac
catgcgccggcgaccctgaacggcgaccaggcggcggcggcttcggccctggcggccggg
gtgacgggcggcgggttccggcccttcctgctggacggggtcacggggtcgggcaagacc
gaggcctatctggaggcgatcgcgcgggtgctgcggtccgatccggcggcgcagatcctg
atccttctgcccgagatcgccctgacccaggccctgatcgagcggatcacggcccggttc
ggcgccgccccggccgaatggcattccggcgtcgccccgccccgtcgccgccaggtgtgg
gaggcggtggtcgccggccggtgcaacatcgtggtcggcgcccgctcggccctgttcctg
cccttcgtcgatctgcggctgatcgtggtggacgaggagcacgacagttcgttcaaacag
gaagagggtctggtctatcacggacgggatctggcggtggcgcgggcgcggatcgagggg
gcggcggtggtcctggcctcggcgacgccgtcgctggagacactgtggaacgcccaggcc
gggcgttacgactggctgaagctgggcgcccggcacggggtggcggtcatgcccgatatc
gaactgctggacctgcgccagcacacgcctgatccccagacctggttgtcccagcccctg
cgtacggcggtggccgagaccctggcgcggggcgagcagaccctgttgttcctgaaccgg
cgcggctatgcgcccgtcgtcctgtgccgcgtctgtgggcaccggctgacggcgccggac
accgacagctggctggtcgagcaccggtacaccggccgtctggtctgtcacctgaccggc
ttttccatggcccggcccaaactgtgcccgtcatgtggagcggaggactcgctggtctcg
gtcggccccggcgtcgaacgggtcgaggaggaggtgcgccagctgttccccgaggcgcgg
acggcggtgttcagctccgacaccgcgcccgacgccaagtctgcgcgggccttgatccag
cggatgaccgacggcgagatcgacatcctggtcgccacccaggccgccgccaaggggcac
aacttcccccgtctgaccctggtcggggtggtggatgcagatctgggtttgcggggcggc
gacctgcgggcggccgaacggacctatcaactgctggcccaggcgacgggacgggcgggt
cgcgccgaccggccggggcgggccattttgcagacctggacccccgaacatccggtgttg
atggccctggcggccggcgaccgcgacgccttcgtcgaggcggagatggccgagcgggaa
gccgccgccctgccccccttcggccggttggcggcgatcatcctgtccagcgagaatgcg
gccgcggtggagaaggtcgccgccgacctggcccaggccattcccaacgccgaacggctg
gaggtctatggccccgccgacgcccccctggccctggtgcgcggacggcgccgcaagcgg
ttgctggtgcgggcggaccgcgacgtgaatcttcaggcgtttctgcgcgcctggctggcg
cgggtgaaggtccccgcctcggtccgactgacggtggacgtcgatccctactccttcctc
tga
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