Brevundimonas mediterranea: GYM46_12380
Help
Entry
GYM46_12380 CDS
T06564
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bmed
Brevundimonas mediterranea
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bmed01011
]
GYM46_12380
Enzymes [BR:
bmed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GYM46_12380
Peptidoglycan biosynthesis and degradation proteins [BR:
bmed01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GYM46_12380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QIH73674
UniProt:
A0A6G7EJT8
LinkDB
All DBs
Position
complement(2538479..2540173)
Genome browser
AA seq
564 aa
AA seq
DB search
MNMFRRASLASTLVFALAASGWAAAGSALAETPFDGMSGAASGSARPTALSSADRLSYTT
AFDALRRGDIEAARASARQAQDRVLLGQVEFESLFHPDHVATYDELTAWLETYSDLPCAD
RVYTLALRRRPDGAPEPVKPGGLLGRTWNSVVSAVSGGPAVDPMKAARIAYNNDDLTGAS
AVGREIGDWWTVGLAEWRLGQFHESFAAFERVANDPTEDPWVRAGAAYWTARAASQSGRQ
DRVNDYLRLAGQWPATFYGQIALRQLGEEPTIENMGPRAYQAEPRLQRAAYVPQGARVET
GELEAFVQTDARAKRTVAYYEVGRRTEGESELRSGLRTAVGDAARMWTALARVMMSGNGG
DATRIDAMRFPMPVLEPEGGFVIEKALVYALARKETDFNPDARSSAGAYGLMQVMPTTAA
EMTGDRTFVTDPSKLLVPATNMRLGQAYINRMLQLPAFQGDLLRAVASYNAGPGPMLTAV
RKLGPDADPLLLIETIDVPQARDYVEKVVASYWIYQRMFGGPLNTLDAVASGAKLVPVSL
DYVPPAPVAEPVLVAQAATVGGGR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgttccgccgggctagtctggcctcgacgctggtttttgcgctcgccgcttca
ggttgggccgccgcaggctcggccctggcggaaacgccttttgacggaatgtccggcgcc
gcgtccggttccgcccgccccacggccctgagttcggccgaccgcctgtcctacaccacc
gccttcgacgccctgcggcgcggcgacatcgaggccgcccgcgcctcggcccgtcaggcc
caggaccgggtcctgctgggccaggtcgagttcgaaagcctgttccaccccgatcacgtc
gccacctatgacgaactgacggcctggcttgaaacctattccgacctgccctgcgccgac
cgggtctataccctggccctgcgccgccggcccgacggagcgcccgaaccggtcaagccc
ggcggtcttctgggtcggacctggaacagcgtcgtttccgccgtctcgggcggcccggcc
gtcgatccgatgaaggcggcgcgcatcgcctataacaatgacgacctgaccggcgcctcg
gccgtcgggcgcgagatcggcgactggtggacggtcggactggcggaatggcggctgggc
cagttccacgaatccttcgccgccttcgaacgcgtcgccaacgatccgaccgaagacccc
tgggtccgcgccggcgccgcctactggaccgcgcgcgccgcctcgcagtcgggccggcag
gaccgggtcaacgactatctgcgcctggccggacagtggccggccaccttctacggccag
atcgccctgcgtcagctgggcgaggagccgaccatcgagaacatggggccgcgcgcctac
caggcggaaccgcgcctgcaacgcgccgcctatgtgccccagggcgcgcgggtcgagacc
ggcgaactggaagcctttgtccagaccgacgcccgcgccaaacgcaccgtcgcctattat
gaagtgggccgacgcaccgagggcgaaagcgaattgcgctcgggcctgcgcaccgccgtg
ggcgacgccgcgcgcatgtggacggctctggcgcgggtgatgatgtcgggcaatgggggc
gacgcgacccggatcgacgcgatgcgcttccccatgcccgtgctggagccggagggcggc
ttcgtcatcgagaaggcgctggtctacgccctggcgcgcaaggagaccgacttcaatccc
gacgcccggtccagcgccggcgcctatgggctgatgcaggtgatgccgacgacggcggcg
gagatgaccggggaccggaccttcgtcaccgatccgtccaaactgctggttcccgcgacc
aacatgcggctgggccaggcctatatcaaccggatgctccagctgccggccttccagggc
gacctgctgcgggccgtggcctcgtacaacgccggaccggggccgatgctgacggcggtg
cgcaagctggggccggacgccgatcccctgctgctgatcgagacgatcgacgtgccccag
gcgcgcgactacgtggaaaaggtcgtggccagctactggatctatcagcggatgttcggc
ggaccgctgaacaccctggacgccgtggcctcgggcgcgaaactggttccggtgtcgctg
gactatgtgccgcccgcgccggtcgccgaacccgtactggtcgcccaggcggccaccgtc
ggcggcggtcgatag
DBGET
integrated database retrieval system
